Flavobacterium dauae: NU10_08100
Help
Entry
NU10_08100 CDS
T09251
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fda
Flavobacterium dauae
Pathway
fda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NU10_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fda03019
]
NU10_08100
Enzymes [BR:
fda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NU10_08100
Messenger RNA biogenesis [BR:
fda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NU10_08100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
CMS1
Motif
Other DBs
NCBI-ProteinID:
WLD22689
LinkDB
All DBs
Position
1659159..1660505
Genome browser
AA seq
448 aa
AA seq
DB search
MATFEQFNLPKSLQKALDELGFIHPTPIQEKSFNIILSGKDVMGIAQTGTGKTFAYLLPI
LKQWKFQPTDAPRVVILVPTRELVVQVVEEVEKLTKYMSIRVLGIYGGVNINTQKTSVYD
GIDILVGTPGRTMDLALDNVLRFDALQKLVIDEFDEILNLGFRTQLTSILSMMKDKKQNI
LFSATMTEEVDEILDDYFNFPEEVSLAPSGTPLEKIKQSAYAVPNFLTKLNILKDILTND
ETSTRVLLFVNNKRLADYVLEQLEEDFPEQFGVIHSNKTQNYRLNTMELFQNGELRGLVT
TDVMARGLDITDITHVFNLQLPEIPEQYIHRIGRTGRADKEGFAVSFVSPKEEEAQLEIE
ELMDYEIPMVEIPSHIKIAEQKLEFEKDRVKMKTNKRKIDAERGEAFHEKKDKNKKVNLG
GPGKRTPRKSAPRNRAVERKRNEKRKKK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatttgagcaattcaatttacccaaatctttacaaaaagcattagacgaatta
ggtttcattcatcctactcctattcaggagaaatcttttaacattatcttatcaggtaaa
gacgttatgggaattgctcaaacaggaaccggaaaaacttttgcctatttacttcctatt
ttaaaacaatggaaatttcaaccaaccgatgcaccacgtgtcgttatcttagtgccaaca
cgcgaattagttgttcaagtggttgaagaggtagaaaaattaaccaaatatatgtcaatc
cgcgtattgggaatttacggtggcgtgaacatcaacacccaaaaaacatcggtttatgac
ggcattgatattttggtgggaacacccggaaggactatggatttggcgttagacaacgta
ctgcgatttgatgctttgcaaaaattggtcattgacgaatttgatgagattctgaattta
ggtttccgtacccagctaacatctattctttctatgatgaaagataaaaaacaaaacatt
ttgttttcggcaacaatgaccgaagaagtagatgaaattttagatgattattttaatttt
cccgaagaggtttcattagcaccatcgggaactccattagaaaaaatcaaacaaagtgcg
tatgctgtacctaattttttgactaaattaaatattttaaaagatattttaacaaatgat
gaaaccagcacacgggttttattatttgtaaacaataaacgattggcagattatgttttg
gaacaattagaagaagattttccggaacaatttggcgttatccattccaataaaacgcaa
aattaccgtttaaacaccatggaattattccaaaatggtgaattgcgtggcttggtaact
accgacgtaatggctcgcggattggacattaccgatattactcacgtttttaatttgcag
ttacccgaaattcctgaacaatacattcaccgcattggtagaaccggacgtgccgacaaa
gaaggttttgctgtgagttttgttagcccaaaagaagaagaagcccagttggaaattgaa
gaactaatggattatgaaattccaatggtcgaaattccttcacatattaaaattgccgaa
caaaaactggaatttgaaaaagaccgtgtgaaaatgaaaaccaacaaacgcaaaattgac
gcggaacgaggtgaagcctttcacgagaaaaaagacaaaaataaaaaggtaaatttaggt
ggtccgggaaaacgaactccgcgaaaatcggctccaagaaaccgtgcggtggaacgtaaa
cgaaacgaaaaacgcaaaaaaaaataa
DBGET
integrated database retrieval system
