KEGG   Flavobacterium dauae: NU10_08855
Entry
NU10_08855        CDS       T09251                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
fda  Flavobacterium dauae
Brite
KEGG Orthology (KO) [BR:fda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fda03032]
    NU10_08855 (gyrB)
   03400 DNA repair and recombination proteins [BR:fda03400]
    NU10_08855 (gyrB)
Enzymes [BR:fda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NU10_08855 (gyrB)
DNA replication proteins [BR:fda03032]
 Prokaryotic type
  DNA Topoisomerases
   NU10_08855 (gyrB)
DNA repair and recombination proteins [BR:fda03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NU10_08855 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4 GyrB_hook
Other DBs
NCBI-ProteinID: WLD22833
LinkDB
Position
complement(1820880..1822820)
AA seq 646 aa
MSEEIKKNSYSADSIQALEGMEHVRMRPSMYIGDVGPRGLHHLVYEVVDNSIDEALAGYC
DSIQVIINQDNSISVQDNGRGIPVGIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLRAEVHNEGKIWEQEYERGKAMYPVRSIGETNVTGTKVTFKPDASIF
TQTLEYSYDTLAARLRELSFLNKGITITLTDLRNVDENGQAKSEIFHSTEGLKEYVRFLD
GNRVPIISHVISMENEKSEVPVEVALIYNDSYSENIYSYVNNINTHEGGTHLQGFRMGLT
RTLKKYADASGLLDKLKFEITGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVS
QAVADMLEAYLEENPADAKTIVQKVILAAQARHAAKKAREMVQRKTVMSGGGLPGKLSDC
SEQDPEKCEIFFVEGDSAGGTAKQGRDRNFQAIMPLRGKILNVEKAMGHKVFENEEIRNI
FTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADVDGSHIATLILTFLFRYMRELIEKGY
VYIATPPLYMVKKGTKKQYAWSDEERIALMEQMGQGSSVQRYKGLGEMNAEQLWETTMNP
EFRTLRQINLDNLAEADRVFSMLMGDEVPPRREFIEKNAVYAKIDA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagtgaagaaataaagaaaaattcgtattctgccgacagtattcaggcattggaggga
atggagcacgttcgtatgcgcccatcaatgtatattggcgatgttggtccgcgaggattg
caccatttggtttacgaagttgttgataactcaatcgatgaagctttagcgggctattgc
gattctattcaggtaatcataaatcaggataattctattagcgttcaggacaatggtcgt
ggtattccggtaggcattcataaaaaagaaggtgtatcggcattagaagtggtaatgacc
aaaattggtgccggtggtaaatttgataaagattcttataaagtttccggtggtttacac
ggagtaggtgtctcttgtgtaaatgcgctttctgaccatttacgtgccgaagtacacaac
gaaggtaaaatttgggaacaagaatatgagcgtggtaaagcaatgtacccggttcgcagc
attggtgaaacaaatgtaaccggaaccaaggtaacttttaagccagatgcttctattttt
acacaaacattagagtattcgtatgatacattggcagcacgtttgcgcgaattatcattt
ttaaataaaggaattaccataacattgaccgatttgcgtaatgtggacgaaaacggtcag
gcaaaatctgaaatttttcattctaccgaaggtttaaaagaatatgttcgatttttagac
ggaaaccgtgtgccaattatcagccacgtaatcagtatggaaaacgaaaaaagcgaagtt
cctgttgaagtagcattgatttataacgatagttattcagaaaatatttattcatacgtt
aataatatcaatacccacgaaggaggaacgcatttgcaaggtttccgtatgggattaact
cgtacattaaaaaaatatgccgatgcttcgggtttgttagataaattgaaattcgaaatt
actggtgacgatttccgtgaaggcctaacagcaattatttctgttaaagtaatggaacca
cagttcgaaggtcaaaccaaaaccaaattaggaaaccgtgaagtggtatcgcctgtatca
caagctgttgctgatatgttggaagcttatttggaagaaaatccggcagatgctaaaact
attgttcaaaaagttattttagcagcacaggcacgccacgcagcaaaaaaagcacgcgaa
atggttcagcgtaaaacagttatgagtggtggtggtttacctggtaaactttcggactgt
tcagagcaagatcctgaaaaatgcgagattttctttgtcgagggagattcggcaggtgga
accgcaaagcaaggtcgtgatcgaaactttcaggcaattatgccattacgtggtaaaata
ttgaatgttgaaaaagcaatgggacacaaagtgttcgaaaacgaagaaattcgtaatatt
tttaccgctttaggtgtaaccattggtaccgaagaagacagtaaagcattgaatctttct
aaattgcgttatcataaagtagtaattatgtgtgatgccgatgttgacggtagccacatt
gctaccttaattttaacgttcttgttccgttacatgcgcgaattaatcgaaaaaggatat
gtttatattgcaacgccgccattatacatggttaaaaaaggaactaaaaaacagtatgct
tggagcgatgaagaacgcattgcgttaatggaacaaatgggacaaggttcgtcggttcaa
cgatacaaaggtttaggggagatgaatgcagaacagctgtgggaaactacaatgaatcct
gaatttagaacccttcgccagataaaccttgataatttagcagaagcagaccgtgtgttc
tctatgttaatgggcgacgaagtaccaccgcgtagagaatttattgagaaaaatgctgtt
tatgcaaaaattgatgcttaa

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