Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
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KO |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:fda00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:fda03032]
NU10_08855 (gyrB)
03400 DNA repair and recombination proteins [BR:fda03400]
NU10_08855 (gyrB)
Enzymes [BR:fda01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NU10_08855 (gyrB)
DNA replication proteins [BR:fda03032]
Prokaryotic type
DNA Topoisomerases
NU10_08855 (gyrB)
DNA repair and recombination proteins [BR:fda03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NU10_08855 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(1820880..1822820)
|
AA seq |
646 aa
MSEEIKKNSYSADSIQALEGMEHVRMRPSMYIGDVGPRGLHHLVYEVVDNSIDEALAGYC
DSIQVIINQDNSISVQDNGRGIPVGIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSDHLRAEVHNEGKIWEQEYERGKAMYPVRSIGETNVTGTKVTFKPDASIF
TQTLEYSYDTLAARLRELSFLNKGITITLTDLRNVDENGQAKSEIFHSTEGLKEYVRFLD
GNRVPIISHVISMENEKSEVPVEVALIYNDSYSENIYSYVNNINTHEGGTHLQGFRMGLT
RTLKKYADASGLLDKLKFEITGDDFREGLTAIISVKVMEPQFEGQTKTKLGNREVVSPVS
QAVADMLEAYLEENPADAKTIVQKVILAAQARHAAKKAREMVQRKTVMSGGGLPGKLSDC
SEQDPEKCEIFFVEGDSAGGTAKQGRDRNFQAIMPLRGKILNVEKAMGHKVFENEEIRNI
FTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADVDGSHIATLILTFLFRYMRELIEKGY
VYIATPPLYMVKKGTKKQYAWSDEERIALMEQMGQGSSVQRYKGLGEMNAEQLWETTMNP
EFRTLRQINLDNLAEADRVFSMLMGDEVPPRREFIEKNAVYAKIDA |
NT seq |
1941 nt +upstreamnt +downstreamnt
atgagtgaagaaataaagaaaaattcgtattctgccgacagtattcaggcattggaggga
atggagcacgttcgtatgcgcccatcaatgtatattggcgatgttggtccgcgaggattg
caccatttggtttacgaagttgttgataactcaatcgatgaagctttagcgggctattgc
gattctattcaggtaatcataaatcaggataattctattagcgttcaggacaatggtcgt
ggtattccggtaggcattcataaaaaagaaggtgtatcggcattagaagtggtaatgacc
aaaattggtgccggtggtaaatttgataaagattcttataaagtttccggtggtttacac
ggagtaggtgtctcttgtgtaaatgcgctttctgaccatttacgtgccgaagtacacaac
gaaggtaaaatttgggaacaagaatatgagcgtggtaaagcaatgtacccggttcgcagc
attggtgaaacaaatgtaaccggaaccaaggtaacttttaagccagatgcttctattttt
acacaaacattagagtattcgtatgatacattggcagcacgtttgcgcgaattatcattt
ttaaataaaggaattaccataacattgaccgatttgcgtaatgtggacgaaaacggtcag
gcaaaatctgaaatttttcattctaccgaaggtttaaaagaatatgttcgatttttagac
ggaaaccgtgtgccaattatcagccacgtaatcagtatggaaaacgaaaaaagcgaagtt
cctgttgaagtagcattgatttataacgatagttattcagaaaatatttattcatacgtt
aataatatcaatacccacgaaggaggaacgcatttgcaaggtttccgtatgggattaact
cgtacattaaaaaaatatgccgatgcttcgggtttgttagataaattgaaattcgaaatt
actggtgacgatttccgtgaaggcctaacagcaattatttctgttaaagtaatggaacca
cagttcgaaggtcaaaccaaaaccaaattaggaaaccgtgaagtggtatcgcctgtatca
caagctgttgctgatatgttggaagcttatttggaagaaaatccggcagatgctaaaact
attgttcaaaaagttattttagcagcacaggcacgccacgcagcaaaaaaagcacgcgaa
atggttcagcgtaaaacagttatgagtggtggtggtttacctggtaaactttcggactgt
tcagagcaagatcctgaaaaatgcgagattttctttgtcgagggagattcggcaggtgga
accgcaaagcaaggtcgtgatcgaaactttcaggcaattatgccattacgtggtaaaata
ttgaatgttgaaaaagcaatgggacacaaagtgttcgaaaacgaagaaattcgtaatatt
tttaccgctttaggtgtaaccattggtaccgaagaagacagtaaagcattgaatctttct
aaattgcgttatcataaagtagtaattatgtgtgatgccgatgttgacggtagccacatt
gctaccttaattttaacgttcttgttccgttacatgcgcgaattaatcgaaaaaggatat
gtttatattgcaacgccgccattatacatggttaaaaaaggaactaaaaaacagtatgct
tggagcgatgaagaacgcattgcgttaatggaacaaatgggacaaggttcgtcggttcaa
cgatacaaaggtttaggggagatgaatgcagaacagctgtgggaaactacaatgaatcct
gaatttagaacccttcgccagataaaccttgataatttagcagaagcagaccgtgtgttc
tctatgttaatgggcgacgaagtaccaccgcgtagagaatttattgagaaaaatgctgtt
tatgcaaaaattgatgcttaa |