Flavobacterium dauae: NU10_11470
Help
Entry
NU10_11470 CDS
T09251
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fda
Flavobacterium dauae
Pathway
fda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NU10_11470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fda03021
]
NU10_11470
03400 DNA repair and recombination proteins [BR:
fda03400
]
NU10_11470
Enzymes [BR:
fda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NU10_11470
Transcription machinery [BR:
fda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NU10_11470
DNA repair and recombination proteins [BR:
fda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NU10_11470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
WLD23321
LinkDB
All DBs
Position
complement(2373880..2374872)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFKGKFEFRPLEPGYGLTIGNALRRVLLSSLEGYAITSVRIE
GVEHEFSTISGVVEDVTEIILNLKQVRFKRQIEDVDNESVSISFTGKDQLTAGDFQKFIS
GFQVLNPDLVICNLDGKITINMEISIEKGRGYVPAEENRKPNAPFGTIYTDSIYTPVKNV
KYAIENYRVEQKTDYEKLVFDIVTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVQVKNLTFGMDLSKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgacaaagttatcatgattgattcaacagatttt
aaagggaaattcgaatttcgtcctttagaacctggctatggattaaccattggtaatgca
ctaagaagagtacttctgtcatcattagaaggatatgcaataacttcggtacgtattgaa
ggtgttgagcatgagttttctactatttctggtgttgttgaggatgtaacagaaattatc
ttaaacttaaaacaagtacgtttcaaacgtcagattgaagatgtagataacgaatctgta
agcatttcattcacaggaaaagatcaattaacagctggcgatttccaaaaatttatttca
ggtttccaagtattgaaccctgatttagttatctgtaacttagacggtaaaattaccatt
aacatggaaatttctatcgaaaaaggtagaggatacgttccagcagaagaaaatagaaag
cctaacgcacctttcggaacaatttatacagacagtatttatacacctgtaaaaaatgtt
aaatacgcgatagaaaactatcgtgtagaacaaaaaaccgattacgaaaagttagttttt
gatattgttacagacggatctattcaccctaaagacgctttaacagaagcagcaaaaaca
ttgattcatcattttatgttgttctctgatgaaagaatcactttagaggccgatgaaatc
gctcaaactgaatcatacgatgaagaatcattgcatatgagacagcttttgaaaaccaaa
ttggtagatatggatctttcggtaagagcattaaattgtttaaaagcggctgaagttgat
acattaggcgatttagtttctttcaataaaaacgatttaatgaagtttagaaacttcgga
aagaaatcattaacagaattagaagaactggttcaggttaaaaatttaactttcggaatg
gatctttcaaaatacaaattagataaagaataa
DBGET
integrated database retrieval system
