Faecalibacterium duncaniae JCM 31915: GXM22_03575
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Entry
GXM22_03575 CDS
T08154
Name
(GenBank) peptidase
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu00550
Peptidoglycan biosynthesis
fdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GXM22_03575
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fdu01011
]
GXM22_03575
Peptidoglycan biosynthesis and degradation proteins [BR:
fdu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GXM22_03575
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-ProteinID:
QIA42222
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All DBs
Position
complement(754617..756488)
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AA seq
623 aa
AA seq
DB search
MPKVLRTLPERGFRRRARAVAVLFCAVCLGLAVRLFFLQVRTDGFYADRAQGQQLRDTVV
PADRGRIYSADGLLLAANSSCWTLRASPREMPEEKITLAAHGLAEILALDEAALLEKFSD
RRSNDCLLRYRVDRAAADAVRDFCEENSITGIRINQDSKRWYPQGAFLASVLGFTNVDNA
GVAGLELKYDDLLTGENGVVLTAVNAWGYTLEQSYETERFPTEGDGLRLTIDSCIQHYLE
NALSYAVQEHHVAARAVGIVMDVNTGAVLAMSTTPSYDPNEPRVIADTAARNAVEALTGD
ARKAALQLAQQTQWRNKAVSDLYEPGSVFKLITCAAALDAGAITKHSSFYCGESISVAGT
RFHCANHKRHGAQSVTQALENSCNQSFIQIGGRLGREAFCDYFAAFGLREPTGIDLPAEP
KKSLYYTADRMGPVELASCAFGQSSKISYLEMAAAVCAVVNGGKLMHPYVVSEILAPDGS
TIEQFSPVCKRQVLKAETSQTMREMMEAVVLHGGGRNAQIPGYRVGGKSGTSQKLDSADE
KARIASFVAVAPIDDPQFLCLVCLDEPHSWTTAGGSLSAPVCAEVLEQTLVYRGVLRTTE
APAASTAETAADLPADGDSFDGA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagttctccgcaccctgcccgagcggggattccgccgccgggcacgggccgtg
gcggtgctgttctgtgccgtctgcctggggctggccgtgcggctctttttcctgcaggtg
cgcaccgacggcttctatgccgaccgcgcacagggccagcagctgcgggacaccgtggtc
cccgcagaccgggggcgcatttacagcgccgacggccttttgctggccgccaacagcagc
tgctggaccctgcgggcctcgccccgggagatgccggaagagaaaatcacccttgccgcc
cacggccttgcggagatcttagcgctggacgaagcggccctgctggaaaaattcagcgac
cgccgctccaacgactgcctgctccgctaccgggtggaccgcgccgcagccgatgccgtg
cgggacttttgcgaagaaaacagcatcaccggcatccgcatcaatcaggacagcaagcgc
tggtatccgcagggcgcgtttctggcttcggtgctggggttcaccaatgtggacaacgca
ggggtggccgggctggaactgaaatatgacgatctgctcaccggagaaaacggcgtggtg
ctcacagctgtcaacgcctggggctacacactggagcagagctacgagaccgagcgtttt
cccaccgagggggacggcctgcggctcaccatcgacagctgtatccagcactaccttgaa
aacgcgctgtcctacgctgtgcaggagcaccatgtggcggcgcgggccgtggggatcgtc
atggatgtgaacaccggggccgtgctggccatgtccaccacgccctcctacgaccccaac
gaaccccgcgtcattgccgacaccgccgcccggaacgccgtggaggccctgaccggtgat
gcacgcaaggccgctttgcagctggcccagcagacccagtggcggaacaaggccgtcagc
gacctgtacgagccgggcagcgtgttcaagctcatcacctgcgcggcggcgctggatgcc
ggagccatcacaaagcattccagcttttactgcggggaatccatctcggtggcaggcacc
cgcttccactgtgccaaccacaagcgccatggggcccagagcgtgacccaggcgctggaa
aattcctgcaaccagagcttcatccagatcgggggccgactgggcagggaggccttctgc
gattattttgccgccttcggcctgcgggagcccaccggcatcgacctgcccgccgagccg
aaaaagagcctgtactataccgccgaccggatgggcccggtggagctggcctcctgtgcc
tttgggcagagcagcaaaatctcctatctggaaatggcggcggcagtctgcgccgtggtc
aacgggggaaagctgatgcatccctacgtcgtctcggagatcctggccccggacggcagt
accattgagcagttctcccctgtctgcaaacggcaggtgctcaaggcagagaccagtcag
accatgcgggagatgatggaggccgtggtgctccacggcggcggacggaacgctcagatc
ccgggctaccgggtaggcggaaaaagcggcaccagccagaagctggacagcgccgacgaa
aaagcccgcattgccagctttgtggcggtggctcccatcgacgacccgcagtttctctgt
ctggtctgcctggacgaaccccacagctggacgaccgcgggcggcagcctgtcggccccg
gtctgtgccgaagtgctggagcagacgctggtgtacaggggcgtgctccgcaccacggaa
gccccggctgcctccacagcagagaccgccgccgacctccccgctgacggcgacagtttt
gacggggcctga
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