Faecalibacterium duncaniae JCM 31915: GXM22_03720
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Entry
GXM22_03720 CDS
T08154
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_03720
Enzymes [BR:
fdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM22_03720
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GXM22_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_16
DEAD
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QIA42248
LinkDB
All DBs
Position
784107..787808
Genome browser
AA seq
1233 aa
AA seq
DB search
MSEPKWTPAQRAAIEDRGGALLVSAAAGSGKTAVLTERAVRLITDPEHPVDADRLLIVTF
TNAAAAELRARIGQALLKRSQAEPGNGALRRQRMLLQRAPICTIDAFCLDLLRKHFQALD
IPPDFSPADPGSVELLRASALSETLENAYRDPDFCAFADLYGKGRTDRAAGETILHVYDF
LRALPDYDKKLDEFLAPWQEENGFAATCWHDLLLAEAARSARAAGELFRAALADCPGDRE
QELADAEEKKTPSAREKAKNAVLEKYTDAQERLDKAAALLGRVEQLAVAGEWTPLYDLLT
PYVLGMEELPGLKGMKKRLNGEHKKVIRTRADEGAALFAQILELIPCSEEEAEADRRAAE
PRLRALFAAVRDFDARFSAKKRDRKLLEFSDFEHQALHLLRDQDGPPTALCGVIRQNYAA
VMVDEYQDTNALQDALYRCLASPAGDDLFLVGDLKQSIYRFRQADPSIFREKLDSWPALP
GGAARPRPAEGTPGTDAMLALDANFRSAPQVVEGINFLFERLMSPELGDTAYGDGQRLIC
GAPGEYTGSVEAHFLPDDTAETDAGWIARRIEELVQSGEPVRDGSATRPVQYEDCCILLA
ARIDFPAYVEALTARGIPVYADARENLLDAPHIRPLIALLKVIDNPAQDIYLAAAMLGPL
FGFTDDDLVRLRARAEEIQKQQGENAPQRISLYGALLLTVNSGEDTPFTGKVRAFYARLT
ELRRMARSVPAEQLLEEIFASTGYLAALGVMENGARRREDARRFASFCAGAGSGGISALV
RAIDAAALAGSTGQDTVPGGSRPGCVTVMTIHRSKGLQFPVVFVADTARRFNAADTRQPV
LLHRMYGAGLRLRPEEGEGAYKTAAYTALSNVHAAEMRSEQMRLLYVALTRAQDKLILTV
PLGIGKTSNPFTRAAAFLEAGAGQTLCRQANSFADWLRAALLVHPNGGPLRRLAEDLELP
FADTGSTITLTVQQALPEGVEPPDPEPEERPLAQADPALTEALRQGFAWQYPAAELARVP
AKVSVTGIVHKAEQTTLERPGFLAKDGLTAAEMGTALHAFLEHADFAALAAAKQAGTLET
AIPAERDRQVEAKLTAPEIAEKLDAGRIRRFVESEAFARICAADEVLRELDFITALPAAE
VLTAQGTDSADSAAVAQAKVLVQGIADLVLVFPNHLELLDYKTDRRKSEDDFLAAYRAQL
DLYALAISKRFAPKPVTYKGIYSLELGKLIEVK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacccaagtggacccccgcccagcgggccgctatcgaggaccggggcggcgcg
ctgctggtgagcgcggcggcgggcagcggcaaaacggctgttctgacggagcgggctgtc
cggctcatcaccgacccggagcatcccgtggatgcggaccgtctgctcatcgtcaccttt
accaatgcggcggcggcagagctgcgggcccgcatcgggcaggcacttctgaagcgcagc
caggcggaacccggcaatggcgcgctgcgccgccagcggatgctgctgcagcgcgcaccc
atctgcaccatcgatgccttctgtctggacctgctgcgcaagcactttcaggcgctggat
atcccgccggacttttcccccgcagaccccggcagtgtggagctcctgcgggcctctgcc
ctgagcgagacgctggaaaatgcctaccgcgacccggatttctgcgcctttgccgacctc
tacggcaagggccgcaccgaccgtgcggcgggcgagacgatcctgcatgtctacgatttc
ctgcgcgccctgcccgattacgacaaaaagctggacgaatttctggctccgtggcaggag
gaaaacggctttgccgccacctgctggcatgatctgctgctggccgaagccgcccgcagt
gcccgggcggcaggggagctgttccgcgccgcgctggctgactgcccgggcgaccgggag
caggagctggccgatgccgaggaaaagaaaacgccctctgcccgggaaaaggcaaagaat
gccgtgctggaaaaatataccgatgcccaggaacggctggacaaggctgccgccctgctg
ggcagggtggaacagctggctgtggcgggggaatggaccccgctttacgatctgctgacc
ccctatgtgctgggcatggaggagctgcccggcctgaaagggatgaaaaagcggctgaac
ggcgaacacaaaaaagtcatccgcacccgcgccgatgagggcgcggccctgtttgcgcag
atccttgagctgatcccctgcagtgaggaggaggctgaggcagaccgcagggccgcagag
ccccgcctgcgggcgctgttcgcggcggtgcgggatttcgatgcccggttctcggccaaa
aagcgggaccggaagctgctggagttcagcgactttgagcatcaggccctccacctgctt
cgtgaccaggacggcccccccactgcgctgtgcggggtcatccggcagaactatgccgcc
gtgatggtggatgaatatcaggacaccaacgccctgcaggatgccttgtaccggtgcctt
gcatccccggcgggggacgacctcttcctggtgggagatctgaagcagagcatctaccgc
ttccggcaggcagaccccagcatcttccgggaaaaactggacagctggcccgccctgcct
ggcggcgcagcgcggccccgcccggcagaggggacccccggcaccgatgccatgctggcg
ctggatgccaacttccgctcggctccgcaggtggtggaagggatcaacttccttttcgag
cggctcatgtccccggaactcggtgacacggcctacggcgacggccagcggctgatctgc
ggggcacccggggaatacacgggcagcgtggaggcgcatttcctgcccgatgacaccgcc
gaaacggacgcgggctggatcgcccggcgcatcgaggaactggtgcagagcggcgagccg
gtgcgggacggcagtgccacccgcccggtgcagtacgaggactgctgcatcctgctggcg
gcgcgcattgattttccggcctatgtggaagcgttgaccgcccgggggatcccggtgtat
gcggatgcccgcgaaaacctgctggatgccccccacatccggcccctcatcgccctgctg
aaggtcattgacaacccggcgcaggatatctatcttgccgccgccatgctgggcccgctg
ttcggtttcaccgatgacgaccttgtccgcctgcgggccagagccgaagagatccagaag
cagcagggggaaaacgccccccagcgcatcagcctctacggcgcgctgctgctcaccgtg
aacagcggggaggacaccccttttaccggaaaagtccgggcgttctatgcccggctgacc
gagctgcgccggatggcccgcagtgtcccggcagaacagctgctggaggaaatctttgct
tccaccggctaccttgccgcactgggcgtgatggaaaacggtgcccgccgccgggaggat
gcccggcggtttgcttccttctgtgccggggccggctccggcggcatctctgcgctggtg
cgggccattgacgctgcggcgctggcaggctccacggggcaggataccgtgcccggcggc
tcccgccccggctgtgtgactgtgatgaccatccaccgctccaaggggctgcagttcccg
gtggtgttcgtggccgatacggcccgtcgcttcaatgcagccgatacccgccagccggtg
ctcctgcatcggatgtatggggcgggcctgcgcctgcgccccgaggagggcgagggcgcg
tacaagacggcggcttacacggcgctctccaatgtccacgccgccgagatgcgcagtgag
cagatgcgcctgctctatgtggcgctgacccgcgcgcaggataagctcatcctgaccgtg
ccgctgggcatcggaaagacctccaatccctttaccagagcggcggccttccttgaagcc
ggggcggggcagacgctctgccgacaggcaaacagctttgccgactggctccgcgcggcc
ctgctcgtccaccccaacggcggccctctgcgccgactggccgaggatctggaactgccc
tttgcggataccgggagcaccatcaccctgacggtgcagcaggcactgcccgagggcgtg
gagccgcccgacccggaacctgaggaaaggccgctggcacaggcagacccggctctgacc
gaggcactgcggcagggctttgcctggcagtaccctgcggcggagctggccagagtgccc
gccaaggtcagcgtgaccggcatcgttcacaaggcagagcagaccacgctggagcgcccg
ggctttctggcaaaggacggcctgaccgccgccgagatgggcacggcccttcacgccttc
ctggagcacgccgattttgcggcccttgcggcggcaaaacaggcaggcacgctggaaacg
gcgatccctgccgagcgtgaccggcaggtggaagcaaagctcaccgcgcccgaaattgcg
gagaagctggatgcagggcgcatccgccgctttgtggagagcgaagcctttgcgcgcatc
tgtgccgcagatgaggtgctgcgggagctggacttcatcacggccctgcctgccgccgag
gtgctgaccgcccagggcactgactccgccgacagcgctgccgtggcacaggcaaaggtg
ctggtgcagggcatcgctgacctggtgctggtgttcccgaatcacctggagctgctggat
tacaagacggaccgccgaaaatccgaggatgacttccttgccgcctatcgcgcccagctt
gacctctatgctcttgccatcagcaagcgttttgccccgaagccggtgacctataagggc
atctactcgctggaactggggaagctgatcgaggtcaagtga
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