Faecalibacterium duncaniae JCM 31915: GXM22_03825
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Entry
GXM22_03825 CDS
T08154
Name
(GenBank) TIM barrel protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXM22_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_03825
Enzymes [BR:
fdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GXM22_03825
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GXM22_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIA42267
LinkDB
All DBs
Position
809557..810411
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AA seq
284 aa
AA seq
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MSEWKIRFGTAGTSDSFTAMGYKNSLDIPAYTEKMGLDAFEYQCGHGVRLGLDKARQMAD
DAAARGILFSVHAPYYISASSLDEEKRLNSVNYLLQSAALCRALGGRRVIFHSGSCGRQS
REAALEKALDTLKRAQDALDEAGFAEITLCPETMGKIGQLGTLEEVLALCGVDRRITPCI
DFGHLNARTLGGIRSKADYAAILDRIGEALGDARARQFHVHFSRIEYSKGGEKRHWTFAE
TQFGPEPQPLMELLAERGLAPVIICESAGTQAEDAQTMQRMYCG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagtggaagatccggttcggcaccgcaggcaccagcgacagcttcacggccatg
gggtataagaacagtctggacattccggcctataccgaaaaaatggggctggatgccttt
gaataccagtgcggccatggagtccggctggggctggacaaggcccggcagatggctgac
gatgccgccgcccgggggattttgttcagcgtccacgcgccttactatatcagcgcctcc
agcctggacgaggaaaagcggctgaacagcgtgaactatctgctccagagcgcggcgctc
tgcagggcgctgggcggcaggcgggtcatcttccactccggcagctgcggcaggcagagc
cgggaagctgccctggaaaaagcgctggacaccctgaaacgggcgcaggacgcgctggat
gaagcgggctttgccgagatcaccctctgccctgagacgatgggaaagatcggccagctg
ggtacgctggaagaggtgttggctctctgcggggtggacagacgcatcaccccctgcatc
gacttcggccacctcaacgcccggacgctgggcggcattcggtccaaggcggattatgcc
gctatccttgaccgcatcggggaggcgctgggggatgcgcgtgcccggcagttccatgtc
catttttcccgcatcgagtattccaagggcggtgaaaagcggcactggacctttgccgag
acccagttcggccccgaaccccagcccctgatggagctgctggccgagcgcgggcttgcg
ccagtcatcatctgtgagagcgccggtacgcaggcagaggatgcacagacgatgcagaga
atgtattgtggatga
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