Faecalibacterium duncaniae JCM 31915: GXM22_04460
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Entry
GXM22_04460 CDS
T08154
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fdu03016
]
GXM22_04460 (truB)
Enzymes [BR:
fdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GXM22_04460 (truB)
Transfer RNA biogenesis [BR:
fdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GXM22_04460 (truB)
Prokaryotic type
GXM22_04460 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIA44303
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All DBs
Position
945016..945900
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AA seq
294 aa
AA seq
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MQGILIVDKPTDWTSFDVIAKLRGILGTRKLGHSGTLDPMATGVLPVFCGGASKAVDLQL
DHTKAYRAVLRLGQRTDTGDVTGTVLETTPVTAGEQELLAVLPQFLGPRMQTPPMYSAVK
INGQPLYKLAREGKTVERKARPIEILDIRYEGSPAENEYALTVKCSKGTYIRVLLEEIAE
AMGQKGTMSALRRVAAGVYSEADAHTLEEIQAAKDAGPEALQALMLPVESVFASLPLLVA
DERVEQHLYNGCPTSRYPAADGRYRVRNAGGQFLGLANVVNGVLKVEKLFVERN
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggatcctcattgttgataagcccaccgattggaccagctttgatgtcattgcc
aagctgcggggcattctgggtacccggaaactgggccacagcggtacgctggaccccatg
gcgaccggtgttctgccggtgttctgcggcggggccagcaaggcagttgatctgcagctg
gaccacaccaaggcctaccgcgctgtcctcagactgggccagcgcaccgataccggggat
gtgaccggcactgtgctggagaccaccccggtaacggcaggggagcaggagctgctggcc
gttctgccgcagttcctcggcccccggatgcagaccccgcccatgtactcggcagtcaag
atcaacggtcagccgctctataagctggcccgcgagggcaaaactgtggagcgcaaggcc
cggccgatcgagattttggacatccggtacgagggcagccctgcggaaaacgagtatgcc
ctgaccgtaaagtgctccaaaggcacctatatccgggtgctgctggaggagatcgccgaa
gccatgggccagaagggcaccatgagcgccctgcgccgcgtggccgccggggtatattcc
gaagccgatgcccacacgctggaagagatccaggcggcaaaggacgcggggccggaggcc
ctgcaggctctgatgctgccggtggaaagcgtgttcgccagcctgccgctgctggtggcg
gacgagcgggtggagcagcacctctacaacgggtgccccaccagccgctatcccgctgcc
gacggccgctaccgcgtgcggaacgccggagggcagtttctgggtcttgccaatgtggtg
aacggtgtgctcaaggtggaaaagctgttcgtggaaaggaactga
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