Faecalibacterium duncaniae JCM 31915: GXM22_04590
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Entry
GXM22_04590 CDS
T08154
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03030
DNA replication
fdu03430
Mismatch repair
fdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXM22_04590
03430 Mismatch repair
GXM22_04590
03440 Homologous recombination
GXM22_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fdu03032
]
GXM22_04590
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_04590
Enzymes [BR:
fdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXM22_04590
DNA replication proteins [BR:
fdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXM22_04590
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXM22_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
QIA42401
LinkDB
All DBs
Position
973049..973783
Genome browser
AA seq
244 aa
AA seq
DB search
MNELRDIFTKYKAVVFFDTETTGLEAESCQIIELAAIRVEKTERGTLRMADSADVFVKLP
EGERIPQKIVELTGITDEQLENEGITEAEAAARFTELISGGRVLLVAHNAQFDLLFTAEM
LRRHGNGGPEALKAADYLDSLTVYKDRRAYPHKLANAILTYKLEGKVQNSHRAIDDVAAL
FEVCKAMDAERSDLLNYVNVFGYNPKYGVSGKRIEKVAYWPQNFNKYMQAPSYTLPAKLR
QRRR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctccgggacatattcacgaaatacaaagcagtcgtattttttgacactgag
acaaccgggctcgaagctgagagctgccagatcattgaactggcagcgatcagagtcgag
aaaaccgaacggggcaccctccgcatggccgacagcgccgacgtgttcgtgaagctgccg
gaaggtgagcggatccctcagaagatcgtcgagctgacggggatcacagacgagcagctc
gaaaacgaaggaatcaccgaggctgaggctgcagctcgcttcactgagttgatcagcggc
ggccgtgtccttctggtagcccacaatgcacagtttgacctcctgtttactgctgaaatg
ctcaggagacacggaaacggcggcccggaggctctgaaagctgccgactatctggacagc
ctgaccgtttacaaagaccgccgggcatatcctcacaagctggcgaacgcgatcctcacc
tataagctggagggcaaggttcagaactcccacagagcgatcgacgacgtggcggcactg
tttgaggtgtgcaaggccatggacgcggaacgctccgatcttctcaactatgtgaacgtg
ttcggatataacccgaagtatggagtaagtgggaaacggatcgaaaaggtggcctactgg
ccgcagaatttcaacaaatacatgcaggctccgagctatacgctcccggccaaactcaga
caaagaaggaggtaa
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