Faecalibacterium duncaniae JCM 31915: GXM22_05025
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Entry
GXM22_05025 CDS
T08154
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fdu03032
]
GXM22_05025
03036 Chromosome and associated proteins [BR:
fdu03036
]
GXM22_05025
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_05025
DNA replication proteins [BR:
fdu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GXM22_05025
Chromosome and associated proteins [BR:
fdu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GXM22_05025
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GXM22_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QIA42486
LinkDB
All DBs
Position
1051917..1052186
Genome browser
AA seq
89 aa
AA seq
DB search
MTKTDLIAQVAANTEMSKKSAELAVNAAFDALSKAMAEGEKITISGFGTFEIRERAERQG
INPRTREPITIAASKSIVFKPGKALKDTL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaccgatctgatcgcacaggttgcagcaaacaccgagatgagcaagaagagc
gccgagctggctgtcaacgccgctttcgacgcactgagcaaggcaatggctgagggtgag
aagatcaccatctctggctttggcacttttgagatccgtgagcgcgcagagcgccagggc
atcaacccccgcacccgtgagcccattaccatcgctgcttccaagagcattgtctttaag
ccgggcaaggctctgaaggataccctgtaa
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