Faecalibacterium duncaniae JCM 31915: GXM22_07955
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Entry
GXM22_07955 CDS
T08154
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fdu03016
]
GXM22_07955 (miaB)
Enzymes [BR:
fdu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GXM22_07955 (miaB)
Transfer RNA biogenesis [BR:
fdu03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GXM22_07955 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QIA43004
LinkDB
All DBs
Position
complement(1639645..1641027)
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AA seq
460 aa
AA seq
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MEYINFEHNETAAELVRAAYDTPPLAFVHSYGCQQNVNDGERIKGVLVDIGYGLCDKPED
ADLILFNTCAVREHAEQRVFGNVGALKGLKEKKRGLMIGLCGCMANQKHVVEKLRKSYPY
VDLVFGVDGIDTLPQLIAQKLQKHKRVLMEPAQRPVIVENIPIRRESEFRAWLPIMYGCD
NFCTYCIVPYVRGREKSRKPGDILAEFRGLVEAGYKEITLLGQNVNSYGKGLEEQVDFAD
LLNLLCAVPGDYQIRFMTSHPKDASHKLIDTIAAQPHLCKHLHLPVQCGSDELLKKMNRH
YTIGQYMELIEYARKKVPGITFSSDIIVGFPGETEEDFQDTLELVKKVGYMQLFTFIYSK
RTGTKAAEMPDPTPRAEKTDRMTRLLKVQDEIAMDLVRQQVGQTVRVLVEGYGRSDGTLS
GRLDNNLTVEFAADPALMGSYAQVHLTGARATVLLGELET
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggaatacattaactttgaacacaacgaaacggctgcggagctggtgcgtgcggcttac
gacaccccgccgctggcctttgtacacagctatggctgtcagcagaacgtcaacgatggc
gagcgcatcaagggcgtgctggtggatatcggctacggcctgtgcgataagcccgaggat
gcagacctcatcctcttcaacacctgcgccgtgcgtgagcacgccgagcagcgcgtgttc
ggcaatgtgggtgcactgaagggcctgaaggagaaaaagcgcggcctgatgatcggcctg
tgcggctgtatggccaaccagaaacatgtggtggaaaagctgcgcaagagctatccctat
gtcgatctggtctttggcgtggatggcatcgatacgctgccccagctcattgctcagaag
ctgcagaagcataagcgcgtgctgatggagcctgcccagcgcccggtcatcgtggagaac
atccccatccggcgcgagagtgagttccgcgcctggctgcctatcatgtacggctgcgac
aatttctgcacctactgcatcgtaccctatgtgcggggccgtgagaagagccgcaagccc
ggcgatatcctggcggagttccgggggctggtggaagcaggatacaaggagatcactctg
ctgggccagaacgtgaacagctacggaaagggcctggaggaacaggtggactttgctgat
ctgctcaatctgctctgcgctgtgcccggcgattaccagatccgctttatgaccagccac
ccgaaggatgccagccacaagctgatcgataccattgcggcccagccccacctgtgcaag
cacctgcacctgccggtgcagtgcggctcggatgaattgctgaaaaagatgaaccgccat
tacaccatcgggcagtacatggagctgatcgagtacgcccgcaaaaaggtgcccggcatc
accttctccagcgatatcatcgtgggcttccccggggaaacggaggaggatttccaggac
acgctggaactggtgaagaaagtcggctacatgcagctgttcacctttatctactccaag
cgcaccggcaccaaggcagcggaaatgcccgaccccaccccccgcgcggaaaaaactgac
cggatgacccgcctgctcaaggtgcaggacgagatcgcaatggatctggtccggcagcag
gtgggccagactgtccgggtgctggtggaaggctatggccgcagcgacggaaccctctcc
ggccggttggacaacaacctgaccgtggagtttgccgctgaccccgccctgatgggcagc
tacgcacaggtgcacctgaccggtgcccgcgccactgtcctgctgggcgaactggaaacg
tga
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