Faecalibacterium duncaniae JCM 31915: GXM22_08955
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Entry
GXM22_08955 CDS
T08154
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03420
Nucleotide excision repair
fdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXM22_08955
03430 Mismatch repair
GXM22_08955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_08955
Enzymes [BR:
fdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GXM22_08955
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXM22_08955
MMR (mismatch excision repair)
Other MMR factors
GXM22_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIA43185
LinkDB
All DBs
Position
complement(1848106..1850754)
Genome browser
AA seq
882 aa
AA seq
DB search
MAASLQQEFCALRDTYIEKQFGRLNDMQRQAVFTTDGPLLILAGAGSGKTTVLVNRIANL
IRFGSAHGSSWTPREVTEDDVKALKTAIMTGTDAPAWLDGMLRQNAVRSWNVMAITFTNK
AAGELKERLRNMLGGEEGDEVFASTFHSACVRILRRWAESIGYPRSFTIYDTDDSQRVMK
AVYKELSIDDKFFPIKSAINQMSRWKDQLVSPEEALRTPARDTKGAIAAKVYAAYEKKLR
EAGAFDFDDLIYQTVQLLAEHEDVREFYQNKYRYLLVDEYQDTSVAQFRLVSLLTGPEKN
ICVVGDDDQSIYRFRGATIENILNFERIFPGTKTIRLEQNYRSTSNILNAANCVIQHNTE
RKGKTLWTRNDEGDKVQVYTAENEQDEAMHIADVIGEHLKEGGHLADHAVLYRMNAQSAP
IESYFTRAGIPHKIVGGQRFNDRKEVKDIHSYMSIVANARDDVRLRRIINEPARKIGNTT
VDVIADLAAQQGISMLEVISHADAYAKLSRAIMPLLKFWQIYEKLQESLETRTLDEFAQD
VIEVTGYKAMLEADAAKGHEDAADRLQNLGQLVNNVKNYCDQHGEDASLEGYLEDIALIS
DIDSYNESADQVVLMTIHSAKGLEFPYVFLIGMEEGVFPSEMSKYSEADLEEERRLAYVG
ITRAKKELYISNSVSRMLYGRTQRNEPSRFLREIEPEYIEETRSPALERRSSMGWGSSYS
DTVPGGASGYSGASGWGRNSSSFGGRTGGSYLNREYNASERGGFGSGYAGRGSSASGFGS
GSSAPRASGSSGFGAGYGRPAAPKAASKPVSFPGSPAASRPAPTGPKHYEVGDIVEHKVF
GRGKVLAVKAAAGDQIVEINFEKVGVKKTMANFAPLTKITEE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagtctccaacaggaattctgcgctctgcgcgatacctatattgaaaagcag
tttggccgcctgaacgacatgcagcggcaggcggtatttaccaccgacggcccgctgctc
attctggccggtgcaggcagcggcaagaccactgttctggtcaaccgcattgcaaacctg
atccggtttggctcggcccacggttccagctggaccccccgtgaggtgaccgaggatgat
gtcaaggctctgaaaacggcaattatgaccggcaccgatgcgcccgcctggctggacggg
atgctgcggcagaacgctgttcgcagctggaacgtgatggccatcacctttaccaacaag
gcggcaggggagctgaaagagcgcctgcgcaatatgctgggcggcgaagagggggacgag
gtgtttgcctctaccttccactcggcctgtgtgcgcatcctgcgccgctgggcagaatcc
atcggctacccccgcagctttaccatctatgataccgatgactcccagcgcgtgatgaag
gcggtctataaggaactgagcatcgacgataagttcttcccgatcaagagcgccatcaac
cagatgagccgctggaaggaccagctggtcagcccggaggaggcgctgcgcactccggcc
cgggacaccaagggagccattgccgccaaagtctacgccgcctacgaaaaaaagctcagg
gaggcaggagccttcgacttcgacgacctgatctaccagaccgtgcagctgctggcagag
cacgaggatgtgcgggagttctaccagaacaagtaccgctacctgctggtggacgagtat
caggataccagcgtggcccagttccggctggtcagcctgctcaccggcccggaaaagaac
atctgcgttgtcggtgacgatgaccagagcatctaccgtttccgcggtgccaccattgag
aacattctgaactttgagcgcatcttccccggcaccaagaccatccgtctggagcagaat
taccgttccacctccaacatcctgaatgctgccaactgcgtcatccagcacaacaccgag
cgcaagggcaagaccctgtggacccggaatgacgagggcgacaaggtgcaggtctacact
gccgagaatgagcaggacgaagccatgcacattgcagatgtcatcggtgagcacctgaaa
gagggcgggcatctggcggaccatgcggtgctctaccgcatgaatgcccagtcggccccc
atcgaaagctactttacccgcgcgggcattccccataagatcgtgggcggccagcgcttc
aatgaccgcaaagaggtcaaggacatccactcctatatgtccatcgtggcgaacgcccgg
gatgatgtgcgcctgcgccgcatcatcaacgagcctgcccggaagatcggcaataccacc
gtcgatgtgatcgctgaccttgccgcccagcaggggatcagtatgctggaagtcatctcc
cacgcggatgcatacgccaaactcagccgtgccattatgccgctgctgaaattctggcag
atctacgaaaaactgcaggaatcgctggaaaccaggacactggacgaatttgcccaggat
gtcattgaggtgaccggctacaaggccatgctggaagccgatgcggccaagggccacgag
gatgcggcagaccgcctgcagaacctgggccagctggtcaacaacgtcaaaaactactgc
gatcagcacggagaggatgcttcactggaaggctacctggaggatatcgccctcatcagc
gacattgacagctacaacgagagcgctgaccaggtggtcctgatgaccatccactctgca
aagggtctggaattcccctatgtgttcctcattggcatggaggagggggtgttccccagc
gagatgagcaaatactccgaggcagatctggaggaagagcgccgtctggcctatgtcggc
atcacccgcgccaagaaggagctgtatatctccaacagtgtctcccggatgctctacggc
cgcacccagcgcaacgagcccagccgcttcctgcgcgagatcgagcctgagtatatagaa
gagacccgcagcccggcgctggagcgccgttcttccatgggctggggttccagttacagt
gataccgtccccggcggggcctcgggttactccggcgcgtccggctggggccgcaattcc
agcagcttcggcggccgcaccggcggcagctacctcaaccgggaatacaatgcctctgag
cgcggcggtttcggctccggttatgcaggccgtggcagcagtgcttccgggtttggcagc
ggaagcagcgccccgcgcgcgtccggctcctccggctttggcgcgggctatggccgcccc
gcggcccccaaggcagcgtccaaacccgtgagctttccggggagcccggcagcttcccgc
ccggcacccaccggcccaaagcattacgaggtgggcgacattgtggagcacaaggtcttt
ggccggggcaaggtgctggcggtcaaggccgctgccggagaccagatcgtggagatcaac
tttgaaaaggtcggcgtgaagaaaaccatggcaaattttgcgccgctgacgaaaatcacg
gaggaatga
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