Faecalibacterium duncaniae JCM 31915: GXM22_09395
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Entry
GXM22_09395 CDS
T08154
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GXM22_09395
09124 Replication and repair
03420 Nucleotide excision repair
GXM22_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fdu03021
]
GXM22_09395
03036 Chromosome and associated proteins [BR:
fdu03036
]
GXM22_09395
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_09395
Enzymes [BR:
fdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GXM22_09395
Transcription machinery [BR:
fdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GXM22_09395
Chromosome and associated proteins [BR:
fdu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GXM22_09395
DNA repair and recombination proteins [BR:
fdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GXM22_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
KH_11
Motif
Other DBs
NCBI-ProteinID:
QIA43258
LinkDB
All DBs
Position
1932245..1934749
Genome browser
AA seq
834 aa
AA seq
DB search
MPTIRLSVRELVEFLLRTGSIDSRFTGFDRANEGARIHRRLQKAAGEGYAAEVFLTAERT
MEGIGFTIEGRADGIFTDEDGTVVIDEIKTTAVPTDAITEDMNPCHWAQGMVYGAICAEQ
RELETLDVRLTYYQTDTDEIIRYTRHFSAAELDAFLNDLLRQYLPWARRQLDWVEARNRS
LGALQFPFPAYRPGQRALAGEVYRACAAGKAEQKGGTRLFCQAPTGIGKTMSALFPALKA
MGEGKGEKIFYLTARNTTQAAAEDALARLRAADPALSLRSVTLSAKEKACLCKDAEGRPA
CLPEACPYANGYYERLKDALADLLDSAVPYDRAALTETARRHRVCPFELGLDLSEWCDVV
IGDYNYLFDPTVHLRRFFDAAGDYIFLIDEAHNLPDRARAMYSARFCKSSLTDARRAIGK
GKSALKTALTKADRGFLEARRAVTKLAPRRGPAPTESPAEDLTQQTSLLDTEPAEAAFPL
PEPLLAQDGTVFLQELPKELLRLLFSLQAPLQDWLEANPEADAHAQLLELYFAVQDITRA
AERYDAHFVTQLTARGSELEWELLCLDPAPFVDASLAAGRAAALFSATLTPPGYYRSVLG
CPDARAVALESPFPPEHLGLYCLPGISTRYRDREASVQAVSDALAALARAKVGNYLAFFP
SYAYLRQVHEDFTARYPDIGTLAQESGLDDAARAAFLEQFGPSPAKTLLGFGVMGGIFGE
GVDLVGDRLIGCAIVGVGLPQVNPRQEILRRYYDEAGGTGFDYAYRFPGMNKVLQAAGRV
IRTQEDRGVVLLLDDRFARGEYTRLFPRHWHQLQYLRSTTELEQQLAAFWARNQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccatccgtctctctgtccgggagctggtggagttcctgctccgcaccggcagt
atcgacagccgctttaccggctttgaccgggccaacgagggcgcacgcatccaccgcagg
ctccagaaggcggcgggtgaaggctacgccgctgaggtgttcctcacggcagagcggacg
atggagggaatcgggttcaccatcgagggccgtgccgacggcatttttaccgatgaggac
ggcacggtggtcatcgacgagatcaagaccaccgccgtgcccaccgatgccatcacggag
gacatgaacccctgccactgggcgcagggcatggtctacggggccatctgcgccgagcag
cgggagctggaaacactggatgtccggctgacctattatcagaccgacaccgatgagatc
atccgctatacccggcacttctccgccgctgagctggatgcgtttctcaacgacctgctg
cggcagtatcttccctgggcacggcggcagctggactgggtggaagcccggaaccggagc
cttggggccctgcaatttccgtttccagcttaccgtcccgggcaacgtgcccttgccggg
gaggtctatcgcgcctgtgctgcgggcaaggcagagcagaagggcggtacccggctgttc
tgccaggcacccaccggcatcggcaaaacgatgagtgccctcttccctgccctgaaagcc
atgggcgagggcaagggggaaaagatcttctacctgaccgcccgcaacacgacacaggcc
gctgctgaggatgcactggcccgtctgcgggcggcagacccggcgctttccctgcgcagc
gtgaccctttcggccaaggagaaggcctgcctgtgcaaggatgctgagggccgtcccgcc
tgcctgccggaagcctgcccctacgccaacggctactacgagcggctgaaggatgcgctg
gccgacctgctggacagcgccgtcccctatgaccgggccgccctgaccgagactgcccgg
cggcacagggtctgcccctttgagctggggctggacctgagcgagtggtgtgatgtggtc
atcggagactacaactatctgttcgaccccaccgtgcacctgcggcgctttttcgatgcg
gcgggcgactacatttttctcatcgacgaagcccacaacctgccggaccgggccagagcc
atgtactcggcacggttctgcaagagcagcctgaccgatgccagacgggccatcggcaaa
ggaaaaagcgcactgaaaaccgcgttgacaaaggcagacaggggctttctggaagcgcgc
cgggcggtaacgaagctggccccccgccggggtccagcgcccaccgaatcgccggcagag
gatctcacccaacagaccagccttctggacaccgaaccggcagaagccgccttcccgctg
ccggagcctttgctggcgcaagatggcacggtctttttgcaagagctgccgaaggagctg
ctccgactgctgttcagcctgcaggcccccttgcaggactggctggaggccaacccggag
gccgatgcccacgcccagctgctggagctctactttgcggtgcaggatatcacccgggca
gcagagcggtacgacgcgcattttgtcacccagctgacagcccggggcagcgagctggaa
tgggagctgctctgccttgaccctgccccctttgtggatgccagccttgccgccgggcgg
gctgcggcactgttcagcgcaacgctcaccccgccgggctactaccgctccgtgctgggc
tgccccgatgcccgggccgtggctctggaaagcccgtttccgcccgaacatctggggctc
tactgcctgcctggcatctccacccgctaccgggaccgggaggccagtgtgcaggccgtc
tcggatgcgctggccgcactggcccgggccaaggtgggcaactatctggccttttttccc
agctacgcctatctgcggcaggtgcacgaggacttcaccgcccgttacccggacatcggg
acgctggcccaggagagtggtctggacgacgcggcccgggcggcctttctggaacagttc
ggcccaagccctgcaaaaacgctgctgggcttcggggtcatgggcggcatcttcggcgag
ggtgtggatctggtgggcgaccggctcatcgggtgtgccatcgtgggggtgggtctgcct
caggtgaacccccggcaggagatcctgcgccgctactatgacgaggcgggcggcaccggt
ttcgactacgcctaccgcttcccaggcatgaacaaggtgctgcaggcggcgggccgggtc
atccgcacgcaggaagacaggggcgtagtgcttctgctggatgaccgctttgcccgcggt
gaatacacccgcctgtttccccgccactggcaccagctccaatacctgcgcagcaccaca
gagctggagcagcagcttgctgccttctgggcacggaaccaatag
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