Faecalibacterium duncaniae JCM 31915: GXM22_09830
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Entry
GXM22_09830 CDS
T08154
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GXM22_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fdu03400
]
GXM22_09830
DNA repair and recombination proteins [BR:
fdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GXM22_09830
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GXM22_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_21
AAA_16
AAA_29
SMC_N
ATPase
DnaJ_CXXCXGXG
AAA_25
DUF463
RsgA_GTPase
Viral_helicase1
RecA
MobB
BCA_ABC_TP_C
AAA_22
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QIA43334
LinkDB
All DBs
Position
2025598..2028111
Genome browser
AA seq
837 aa
AA seq
DB search
MNHESSSALPAAIRVRGARVHNLKNIDVDVPLHKIVGIAGVSGSGKSSLALGVLYAEGSR
RYLEALSTYTRRRMTQAEKAQVDEIRYVPAALALHQRPGVPGMRSTFGTMTELLNSLRLM
FSRLSHYPCPSCGCMVPPSLNIAAEIPLYCPRCGAQVPVLGAEQFAFNSTGACPDCEGTG
IVRVVDESTLVPDESLSINEGAVLPWQTLMWSLMKEIAEKMGVRTNVPFRELTPEERDMV
FHGPAKKVHLLYQNSKTGAAGEMDFTYFNAVYTVENALAKVTDEKGMKRVERFLKQGPCP
ACGGSRLNAAARAPRLRGIGLADACRMTLDTLVQWVEGVPASLPVEMRPMAESICESFQA
TAARLLDLGLGYLSLDREAATLSTGERQRVQLARSVRNRTTGVLYVLDEPSIGLHPSNIE
GLRGVMHDLIADGNSIVLVDHDTEILRDADWLIEMGPGAGENGGTILTQGTVEQVAQSPA
SRIGPFLADLHTLSARTRTPEAELFALGTITLRTRAIHTVKPLEVRLPKGRLIAVTGVSG
SGKTTLVLESLIPALEAAAKGEALPAHVESITAPGIAQVKLIDATPIGINVRSTVATYAN
VHDELRKIYARSPLAREKGYKAGDFSYNTGRLRCPGCDGTGTISLDIQFLPDVEITCPDC
GGSRYQKDAATLYRTRKDGTQAESLPRLMEMSVDEALAACSDLKLVASRLQTLSSLGLGY
LTLGEATPSLSGGEAQRLKLASEMGKGQADTVFVFDEPTIGLHPLDVRTLLGVFQRLIDS
GATVVVIEHDLDVIRNADYLVDLGPGGGESGGRIVACGTPEQVAADPASITGKYLHL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgaatccagttccgctctccccgccgccatccgggtgcggggcgcgcgggtg
cacaacctgaagaacatcgatgtagatgtgccgctccacaagatcgtcggcattgcgggc
gtgtccggttccggcaagtcctcgctggcgctgggtgtcctctacgccgagggctcccgc
cgctatctggaggccctttccacctatacccgccgccggatgacccaggccgaaaaggcg
caggtagacgagatccgctatgttcccgccgcactggccctccaccagcggcccggcgtg
cccgggatgcgttccacctttggcaccatgaccgagcttttgaacagcctgcggctgatg
ttctcccggctgtcccactacccctgccccagctgcggctgcatggtgccgcccagcctg
aacattgcggccgagatcccgctctactgcccccggtgcggcgcacaggtgccggtgctg
ggcgcggagcagtttgcctttaacagcaccggagcctgcccagactgcgagggcaccggc
atcgtgcgggtggtggacgaatccactctggtgccggacgagagcctttccatcaacgag
ggcgcggtgctgccctggcagaccctgatgtggtcgctgatgaaggagatcgccgaaaag
atgggcgtgcgcaccaacgttcccttccgggagctgaccccggaagagcgcgacatggtg
ttccacggccccgccaaaaaagtgcatctgctctaccagaacagcaagaccggcgcggcg
ggcgaaatggatttcacctacttcaacgctgtttataccgtagagaacgctcttgccaag
gtgacggatgaaaagggcatgaagcgggtggagcggttcctgaagcagggcccctgcccc
gcgtgcggcggctcccgcctgaacgccgcggcccgggctccccggctgcggggcatcggg
ctggccgatgcctgccgcatgacgctggacacgctggtacagtgggtggagggggtgccc
gcctccctgcccgtggagatgcgccccatggctgaaagcatctgcgagtcctttcaggcc
accgctgcccgcctgctggatctggggctgggctacctctcccttgaccgggaggctgcc
accctttccacaggggagcgccagcgggtgcagctggcccgctcggtgcgcaaccgcacc
accggcgtactctatgtgctggacgagccctccatcggtctgcacccctccaacatcgag
ggcctgcggggcgtgatgcatgacctgatcgcggacggcaactccattgtgctggtggat
cacgacaccgagatcctgcgggatgccgactggctcattgagatgggccccggtgccggt
gaaaacggcggcaccatcctgacgcagggcactgtggagcaggtggcccaaagcccggct
tcccgcatcgggcccttccttgccgacctgcacaccctctcagcccgcacccgcaccccg
gaggcggagctctttgcgctgggcaccatcaccctgcgcacccgggccatccacaccgtc
aagccgctggaagtccggctgcccaaggggcggctcattgcagtgaccggcgtgtccggt
tccggcaagaccacgctggtgctggaaagcctgatccccgcgctggaggccgccgccaag
ggcgaagctctgcccgcccatgtggaaagcatcactgcaccgggcattgcgcaggtcaag
ctcattgacgcaacacccatcggcatcaatgtgcggtccacggtggccacctatgccaat
gtccacgatgaactgcgcaagatctacgcccgctccccccttgccagggagaagggctac
aaggcgggcgatttttcctacaacacgggccgcctgcgctgccccggctgcgacggcacc
ggcaccatcagcctggacatccagttcctgccggatgtggagattacctgcccggattgc
ggcggctcccgctaccagaaggatgccgccaccctctaccgcacccggaaggacggcacc
caggccgagagcctgccccgcctgatggagatgagcgtggacgaagcccttgccgcctgt
tccgacctcaagctggtggccagccggctgcagaccctttccagcctggggctgggctac
ctgactctgggcgaggccacccccagcctttcgggcggggaggcccagcggctcaagctc
gccagcgagatgggcaaagggcaggctgacaccgtgtttgtattcgatgaacccaccatc
ggcctgcacccgctggatgtgcgcactctgctgggcgtgttccagcgcctcattgacagc
ggggccactgtggtggtcattgagcacgatctggatgtgatccgcaacgccgactatctc
gtggaccttggccccggcggcggtgagagcggcggacgcatcgtggcctgcggcacaccg
gagcaggtggccgccgatcccgccagcatcaccggaaaatatctgcacctgtaa
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