Faecalibacterium duncaniae JCM 31915: GXM22_13260
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Entry
GXM22_13260 CDS
T08154
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fdu
Faecalibacterium duncaniae JCM 31915
Pathway
fdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXM22_13260 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fdu03019
]
GXM22_13260 (rny)
Messenger RNA biogenesis [BR:
fdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXM22_13260 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
DUF2749
Motif
Other DBs
NCBI-ProteinID:
QIA43944
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Position
complement(2767842..2769413)
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AA seq
523 aa
AA seq
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MSPIILLIVVVVAAVAAGAGYFIGYNNRKKTAEAQIGSAEAEATRLVNEAIKTADQKRKE
AVLEAKDEAFRLKAEVDAQKAEADKEIKQRRAEISRQENRIDQKENALDRKTEALEKKEE
ELKKKHEEADSRLAEVDAIRAKEMERLETLAGLSQEDAREVLLHKVDEELTHEKAVRVAA
YETDLKENCDNIARNMIGQAISRCAADHCSETTVSVVPLPSDEMKGRIIGREGRNIRALE
TATGVDLIIDDTPEAITLSSFDQTRREVARMTLERLIGDGRIHPARIEETVEKCRHDLEL
QMKREGERAVMELGIHGLHPDLIKLIGRLKYRTSFGQNALTHSMEVAWLAGLLAGEMGVN
VTLARRAGLLHDIGKALDHEIEGSHVQIGVDICRKYKENTQIIHAIEAHHGDVEPKTPLA
FIIQACDAISAARPGARRENVESYVKRLENLEEISSSFEGVEQAFAVQAGREVRIMVKPD
VISDDQVILLARQIAKKIEDTLDYPGQIKVNVIRESRAIEYAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgatcattctgttgatcgtggtcgtggttgctgctgttgctgccggcgcgggt
tattttattggttacaacaaccgtaaaaagactgccgaggcacagatcggcagcgcagaa
gccgaggctacccgcctggtgaacgaagcaatcaagaccgctgaccaaaaacgaaaagaa
gctgttctggaagccaaggatgaggctttccgtctgaaagccgaggtcgatgcccagaag
gcagaggccgacaaggagatcaagcagcgccgtgctgagatcagccgccaggagaaccgc
attgaccagaaggaaaatgcgctggaccgcaagaccgaagccctggaaaagaaggaagaa
gagctcaagaaaaagcacgaggaggccgacagccgcttggctgaggtggatgccatccgt
gccaaggagatggagcgcctggagaccctggcgggcctgagccaggaggatgcccgcgaa
gtgctgctgcacaaggtggacgaggagctcacccacgagaaggctgtccgtgtggctgcc
tacgagaccgacctgaaggaaaactgcgataacatcgcccgaaacatgatcggtcaggcc
atcagccgctgcgccgctgaccactgcagcgagaccaccgtcagcgtggtgcccctgccc
agcgacgagatgaagggccgtatcatcggccgtgagggccgcaacatccgcgcgctggaa
actgccaccggcgtggatcttatcatcgacgataccccggaggctatcaccctgtcctcc
tttgaccagacccgccgcgaggttgcccgcatgacgctggagcgcctgatcggtgatggc
cgcatccaccccgcccgcattgaggagacggtggagaagtgccgccacgaccttgagctg
cagatgaagcgggagggcgagcgcgccgtgatggaacttggcatccacggcctgcacccc
gacctcatcaagctcatcggccgcctgaagtaccgcaccagctttggccagaacgctctg
acccacagcatggaggtggcctggctggccggtctgctggcaggcgagatgggcgtgaac
gtcacgctggcccgccgtgccggtctgctgcatgatatcggcaaggcccttgaccacgag
atcgagggcagccatgtccagatcggtgtggatatctgccgcaagtacaaggaaaacacc
cagatcatccatgccattgaggcccatcacggcgacgtggagcccaagaccccgctggcc
tttatcattcaggcctgcgatgccatcagcgccgcacgtcccggtgcccgccgcgagaac
gtggagagctatgtcaagcgtctggaaaatctggaggagatctcttccagctttgagggc
gtggagcaggcctttgccgttcaggccggccgtgaagtccgcatcatggtcaagcccgat
gtcatcagcgatgatcaggtcatcctgctggcccgccagatcgccaagaagatcgaggat
accctcgattatcccggccagatcaaggtcaacgtcatccgcgagagccgcgccatcgag
tacgcgaagtaa
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