Flavobacterium davisii: JJC05_01395
Help
Entry
JJC05_01395 CDS
T10287
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fdv Flavobacterium davisii
Pathway
fdv00260
Glycine, serine and threonine metabolism
fdv00460
Cyanoamino acid metabolism
fdv00630
Glyoxylate and dicarboxylate metabolism
fdv00670
One carbon pool by folate
fdv00680
Methane metabolism
fdv01100
Metabolic pathways
fdv01110
Biosynthesis of secondary metabolites
fdv01120
Microbial metabolism in diverse environments
fdv01200
Carbon metabolism
fdv01230
Biosynthesis of amino acids
fdv01240
Biosynthesis of cofactors
fdv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fdv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JJC05_01395
09102 Energy metabolism
00680 Methane metabolism
JJC05_01395
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JJC05_01395
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JJC05_01395
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JJC05_01395
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JJC05_01395
Enzymes [BR:
fdv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JJC05_01395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QYS89118
LinkDB
All DBs
Position
complement(269785..271059)
Genome browser
AA seq
424 aa
AA seq
DB search
MLRDEQIFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPNKRYYGGC
EVVDVVEQIAIDRAKALFGAAYVNVQPHSGSQANTAVFAACLQPGDTILGFDLSHGGHLT
HGSPVNFSGKLYRPVFYGVNQETGMLDYDKIQEVATKEQPKLIIAGASAYSRDMDFKRFR
EIADSVGAILMADISHPAGLIAKGLMSDPIPYCHIVTTTTHKTLRGPRGGMIMMGEDFPN
PWGYTTPKGDVKMMSNLLDMAVFPGNQGGPLMHIIAAKAVAFGECLSDEFFTYAMQVQKN
AKAMAEAFVKRGYNIISGGTDNHMMLIDLRNKGITGKEAENVLVKAEITVNKNMVPFDDK
SPFITSGIRVGTPAITTRGLVETDMDKIVDFIDRVLTNHTNEEVIEQVANEVNEMMSERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgacgaacaaatattcgatttaattcttgatgaacaagatagacaaattcac
ggtattgaattaattgcttcagagaattttgtaagcgaccaagtaatggaagcagcaggt
tcttgtttgactaataaatatgcagaaggataccctaacaaaaggtactatggaggttgc
gaagtagtagatgtggtagaacaaattgctattgatagagcaaaagctttgtttggagca
gcgtatgttaatgtacaacctcattcaggctctcaagctaatacagctgtttttgcagct
tgtttacaaccaggtgatacaattttaggttttgacttatcacatggaggacacttaacg
catggatctcctgtgaatttttcaggaaaattataccgacctgttttttatggtgtaaat
caggaaacagggatgttagattatgacaaaattcaagaagtagccactaaagaacaacct
aaattaattattgcgggggcttctgcttattctcgtgatatggattttaaacgttttcgt
gaaatagcagattctgtaggcgctattttaatggcagacatttctcatccagcaggttta
atagcaaaaggattaatgagtgatcctattccttattgtcatattgtaacaacaactact
cataaaactttacgtgggccacgtggaggtatgatcatgatgggagaagattttcccaat
ccttggggatacacaacgcctaaaggggatgtaaaaatgatgtctaatttattagatatg
gctgtttttccaggaaatcaaggcggtcctttaatgcacattatagctgctaaagcagtt
gcttttggcgaatgtttatcggatgagttctttacttatgctatgcaagtacaaaaaaat
gcaaaagcaatggcagaagcatttgtaaaaagaggttataacatcatatcaggaggaaca
gataatcacatgatgttgatagatttacgtaacaaaggcattacaggaaaagaagctgaa
aatgtattagtaaaagcggaaattactgtaaataaaaatatggttccttttgatgataaa
tcaccttttataacttctggtattcgtgttggaacaccagctattactactcgtggttta
gtagaaacagatatggacaaaatcgtagattttatagatcgagtattaacgaatcatacc
aatgaagaagttattgagcaagtagctaatgaagtaaatgaaatgatgagtgaacgcgct
atgtttgttttttag
DBGET
integrated database retrieval system