Flavobacterium davisii: JJC05_03145
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Entry
JJC05_03145 CDS
T10287
Name
(GenBank) peptidase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fdv Flavobacterium davisii
Brite
KEGG Orthology (KO) [BR:
fdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fdv03016
]
JJC05_03145
Enzymes [BR:
fdv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
JJC05_03145
Transfer RNA biogenesis [BR:
fdv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JJC05_03145
Prokaryotic type
JJC05_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Radical_SAM_N2
Motif
Other DBs
NCBI-ProteinID:
QYS89361
UniProt:
A0A8G0KSN1
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All DBs
Position
complement(626600..627547)
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AA seq
315 aa
AA seq
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MFTAEIKSKIGEDISILIKPENYSYNFICECGDASDLTVKDCQNTEAIFISHTHIDHFVN
FDTILRHQIGIQRRVVICGPTGITQQVQSKLKGYQWNLIAEDAIVYEVREIQNEGKITCS
EIKPPFWNIEPIDKELDCLYQNEKCTVEFVLLDHKTPSVAYLFKEHDTVKIDLGKAQFKG
GAWVNVLKNAYANQEDDLQITIEAVTYLAKDLYYLLELKKGHRLGVIMDHAANEANHDLI
YSLFNECDTVYIESFYKAEDKEQAQQNYHSYSSESARIMKKCQVKNAIPVHFSRRYKEED
IQIVIQEFAQVFENQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtttacagccgaaataaaaagcaaaataggagaggacatctccattttaataaaaccc
gaaaattattcgtataactttatttgcgaatgtggcgacgccagtgatttgaccgtaaaa
gactgtcaaaacaccgaagcgatcttcatcagtcacacccatattgaccactttgtcaat
tttgatacgatactccgtcaccaaattggtatacaacgccgagtggtgatttgtggacca
acaggtataacccaacaagtacaatctaaattaaaagggtatcagtggaacttgattgca
gaggatgccattgtgtatgaagtacgagagattcaaaacgagggtaaaattacctgctcc
gaaattaaaccaccattttggaacattgaacccatcgataaggaattggattgtctatat
caaaatgaaaaatgcaccgtcgaatttgtattgttggatcataaaacaccttctgtagcg
tatctttttaaggaacacgacaccgttaaaatcgatttaggcaaagcccaatttaaaggt
ggggcttgggttaatgtattgaaaaatgcttatgccaaccaagaggatgatttgcaaatc
acgatcgaagcagttacttatcttgccaaagatttatattacttgcttgaacttaaaaaa
ggccaccgattaggtgttattatggatcacgccgctaatgaagcaaatcacgatttgatt
tatagcttgttcaacgaatgcgatactgtttatatagaaagtttttacaaagccgaagat
aaggagcaagcacagcaaaattaccatagctattctagtgagtctgctcgaattatgaaa
aaatgtcaagtaaaaaatgctattccagtacatttctcccgaagatataaagaggaagat
attcaaatagttatacaggaatttgctcaagtatttgaaaatcaatag
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