Flavobacterium davisii: JJC05_12560
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Entry
JJC05_12560 CDS
T10287
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fdv Flavobacterium davisii
Pathway
fdv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fdv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JJC05_12560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fdv01007
]
JJC05_12560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fdv03016
]
JJC05_12560
Enzymes [BR:
fdv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
JJC05_12560
Amino acid related enzymes [BR:
fdv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JJC05_12560
Transfer RNA biogenesis [BR:
fdv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JJC05_12560
Prokaryotic type
JJC05_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
QYS88480
UniProt:
A0A8G0KVP6
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All DBs
Position
2645972..2647390
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AA seq
472 aa
AA seq
DB search
MKPSIPKGTRDFSPSEVAKRNYIFGTIRKHFERFGFQPIETPTFENSDTLMGKYGEEGDR
LIFKILNSGNYFFNRKKIELPFSIEELQLNSAETISTKQLIELNQFTSRISEKALRYDLT
VPFARYVVQHQNEIEFPFKRYQIQPVWRADRPQKGRFREFYQCDADVVGSTSLWQEVELV
QLYDAVFADLGLKGVTIKVNNRKILSGIAEVIGASDKLIDFTVALDKLDKIGEDGVKKEM
LEKGISEVAIEKIQGLFDFTGTITEKIEKLSKLLENSNEGMKGIEELQFICQNVLAVGLQ
ESKLDLDVTLARGLNYYTGAIFEVSAPEGVSMGSIGGGGRYDDLTGIFGLKNMSGVGISF
GLDRIYLVIEELGLFPEAVLGTSKAIFLNFGSEEALYSMKTITKLRQLGIKVELYPDSVK
IGKQFQYADKRGIPFAVIVGEEEMNKDEYNLKNLQSGEQKRVSFDELIKDLQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatccattccaaaagggactcgtgatttttcaccttcagaagtagctaaaaga
aattatatatttgggacgattcgtaagcattttgaacgttttggatttcaacctatagaa
acgcctacttttgaaaactcagatacattaatggggaaatatggagaagaaggagatcgt
ttaatatttaaaattttaaattcagggaactatttttttaatagaaaaaaaattgaatta
ccttttagtattgaagaactacaattaaattctgctgaaacgatttcaacaaaacagcta
attgaattgaatcaatttactagtagaatttcagaaaaagcacttcgttacgatctaact
gttccatttgcgcgttatgtagtacagcatcaaaatgaaattgaatttccatttaagcgt
tatcaaatacagcctgtttggagggcggatagaccccaaaaaggacgctttagagaattt
tatcaatgcgatgcagatgtggttgggtcgacttccttatggcaagaagtagaattggtt
cagttgtacgatgctgtttttgcagatttagggttaaaaggagtaactataaaagttaat
aatcgtaaaattttatccggtatagcagaggtaattggtgcttctgataaattaattgat
ttcaccgtagccttagataaattagataaaataggagaagacggagttaagaaagaaatg
cttgaaaaaggaatttcggaagtcgcaattgaaaaaatacaaggattgtttgattttaca
ggaacaataacagaaaaaatagaaaaactttcaaaactcctagaaaattctaatgaaggg
atgaaaggtatagaggaattacaatttatttgtcaaaatgtattagctgtaggtcttcaa
gaatctaaattagatttagatgttactcttgcacgagggttaaattattatacaggtgct
atatttgaagtttcagcacctgaaggcgtgagcatgggatctataggaggaggaggaaga
tatgatgatttaacggggatctttggacttaaaaacatgagtggagtgggaatttcattt
ggtttggataggatttatctagtaatagaagaattgggattgtttcctgaagccgtatta
ggtacttctaaagccatttttttaaattttggttcagaagaagccttatattcaatgaaa
acaataaccaaattacgtcaactcggtataaaagtagagttgtatcccgattcagtaaaa
ataggaaaacagtttcaatatgcagataaaagaggtattccatttgccgttatagtagga
gaagaagaaatgaacaaagacgaatataatttaaaaaatctgcaatcaggtgaacaaaaa
agagtttcttttgatgagttaattaaagacttacaataa
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