Flavobacterium davisii: JJC05_12685
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Entry
JJC05_12685 CDS
T10287
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fdv Flavobacterium davisii
Pathway
fdv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fdv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJC05_12685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fdv02000
]
JJC05_12685
Enzymes [BR:
fdv01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JJC05_12685
Transporters [BR:
fdv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JJC05_12685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
AAA
AAA_22
AAA_15
AAA_29
DEAD
ABC_ATPase
MMR_HSR1
PPV_E1_C
nSTAND3
AAA_23
APS_kinase
AAA_16
AAA_24
AAA_25
PRK
AAA_18
Ploopntkinase3
Motif
Other DBs
NCBI-ProteinID:
QYS88498
LinkDB
All DBs
Position
complement(2670778..2672610)
Genome browser
AA seq
610 aa
AA seq
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MDHNLKKIIPYALRYRTNIIWNITFNILYALFSTLLMVSIMPTLEVLFKQNTKISKKPIY
TGLSNLKDFLSNSFNYKLTEISDEYGKQNALLVVISIVIITALLKNLFNYLGSRQVTILR
NGVLRDLRIKLYSKIINLPVSYYSDTRKGDVMARMLGDVGEVQNSFFQILELIVREPMTI
VFSIIAMLFISIKLTLFVFIFIPISGFIISRIGKTLKSKSQKAQQEQGIFISILDETLSG
LKVVKGFNAESIFIQKFNDSVNRVLKLSNSIANKNNLSSPMSEFFGIVTIATLLWYGGHL
VLVEKSLAGTAFIGYIALAYTILQPAKSISKSSYQVKSGLAAAERVFTLLEQESQIVDLP
DALDKKDFTNSIKIENIHFAYADDNNVLKNFTIDVPKGKTIALVGQSGSGKSTIANLLTR
FYDVNEGKISIDGTDIKEISMQSLRSLMGIVTQDSILFHDSIKNNLLIGKPTATDEEIIH
ALKVANAYEFVINLPNGIETNIGDAGGKLSGGQKQRLSIARAVLKNPPIMILDEATSALD
TESEKLVQVALENMMQNRTSIVIAHRLSTIQKADNIIVMQKGEIVEQGTHSELLAKNGTY
SKLVMMQSLE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatcataatttaaaaaaaataattccatacgcattaagatacagaacaaatattatt
tggaatattacattcaacatcctttatgctttgttcagcacactcttaatggtatctatt
atgcctactctagaggttctctttaaacaaaatacaaaaattagtaaaaagcctatttac
acaggtttatctaatttaaaggattttttatcaaattcttttaattataaattaactgaa
atttcagatgaatatggtaaacaaaacgctttattagttgttataagtattgtaatcatt
acagctttattaaaaaacttatttaactatttaggatccagacaggttacaatattaaga
aatggtgtattaagagatctacgtattaagttatatagcaaaattattaatctccccgtt
tcttattattcagatactagaaaaggagatgttatggctcgtatgttaggagatgtggga
gaagttcaaaattcctttttccaaatcttagaacttatcgttcgcgaaccaatgactatc
gtcttttctattattgctatgttatttattagtataaaacttaccttatttgtttttata
tttattcctatttcaggatttataatttcaagaattggtaaaacattaaaatctaaatcg
caaaaagcccaacaggaacaaggtatttttatttctattttagacgaaactttatcagga
ttaaaagttgtaaaaggatttaatgcagaatctattttcattcaaaaatttaatgattct
gttaatcgtgttttaaaattatcaaacagtatagcaaataaaaacaatctatcctctcct
atgagtgaattttttggtatcgtaactattgctactttattatggtatggaggtcatttg
gttttggttgaaaaaagccttgctggaacagccttcattggttatatcgcattagcttac
actattttacaacctgctaaatctatttcaaaatcttcttatcaggtaaaaagtggtcta
gctgccgctgaaagggtttttactttactagaacaagaaagccaaatagtagatttacca
gatgctctagataaaaaagattttacaaattctatcaaaattgagaacattcattttgct
tatgcagatgacaacaatgtcttaaaaaattttactattgacgttccaaaaggaaagacc
attgcattagtaggtcaatctggatcaggaaaaagtacaattgccaatttacttactcgt
ttttatgatgtaaatgaaggaaaaataagtatagatggaaccgatattaaggaaatttca
atgcagtctttgagatctttaatggggattgttacacaggactctatcttgtttcacgat
tctataaagaataatttattaattggtaaacctacagctactgatgaagaaattattcat
gctttaaaagttgctaatgcgtatgaatttgtaatcaatttacctaatggtatagagacc
aatatcggtgatgcaggtggaaaattatctggcggacaaaaacaacgtttgtctattgca
agagcagtattaaaaaatccgccaatcatgatccttgatgaagctacttctgctcttgat
acagagagtgaaaaattagtacaagtggctcttgaaaacatgatgcaaaacagaacttct
atcgtaattgctcatagactttctactatacaaaaagcagacaatattattgtgatgcaa
aaaggagaaattgttgaacaaggcacacacagcgaattacttgctaaaaatggtacttat
tcgaaacttgtcatgatgcaaagtttagaataa
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