KEGG   Flavobacterium davisii: JJC05_13415
Entry
JJC05_13415       CDS       T10287                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
fdv  Flavobacterium davisii
Pathway
fdv03030  DNA replication
fdv03430  Mismatch repair
fdv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fdv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JJC05_13415
   03430 Mismatch repair
    JJC05_13415
   03440 Homologous recombination
    JJC05_13415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fdv03032]
    JJC05_13415
   03400 DNA repair and recombination proteins [BR:fdv03400]
    JJC05_13415
Enzymes [BR:fdv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JJC05_13415
DNA replication proteins [BR:fdv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JJC05_13415
DNA repair and recombination proteins [BR:fdv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JJC05_13415
SSDB
Motif
Pfam: RNase_T RNase_H_2 ExoX-like_C Rv2179c-like
Other DBs
NCBI-ProteinID: QYS88596
UniProt: A0A8G0KR86
LinkDB
Position
2817358..2818131
AA seq 257 aa
MELKLNRPICFFDLETTGTDISKDRIVEISIIKVFPNGNKESKTWLVNPTIPIPVQAAAI
HGISDQKVANEPTFSELASQVHSMIKDSDLAGFNSDRFDIPLLAEELLRAGVDFDMKNRV
SVDVQTIFHKKEERTLSAAYKFYCNQSLENAHSAEADTNATYEILKAQLDRYPDLENDMK
ILSEYTTRKKSVDFAGFIALNEKGQEIFAFGKHKGALVEEVFDKEPWYFGWIQNADFPLY
TKKVLTGIKLRKLNTKQ
NT seq 774 nt   +upstreamnt  +downstreamnt
atggagttaaaattaaatcgtccgatttgtttttttgacttagaaactacagggacagat
atttcaaaagatcgaattgttgaaatttcaataataaaagtttttccaaatggaaataaa
gaaagtaaaacatggttggtaaatcctactattcctattccagtacaagcagctgccatt
catggtatttcagatcaaaaagtagcaaatgagcctactttttcagaattagctagtcaa
gtacatagtatgataaaagattctgatttagcaggatttaattcggatcgttttgatatt
cctttattagcagaagaattactacgtgcaggagttgattttgatatgaaaaatagagtt
tctgttgatgttcaaactatttttcataaaaaagaagaacgtacattgagtgctgcatac
aaattctattgcaatcaatctttggaaaatgcacatagcgcagaagcggataccaatgcc
acttacgaaatcttgaaagcacagctagatcgttatcctgatttagaaaacgatatgaag
atattgtcagagtatacaacccgtaaaaaatcagttgattttgcaggttttattgcttta
aatgaaaaaggacaagaaatctttgcttttggtaaacataaaggagccttagttgaagag
gtttttgataaagaaccgtggtattttggatggatccaaaatgctgattttcctttatac
actaaaaaagtattaacagggattaaattgagaaaattaaatacaaaacagtaa

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