Fictibacillus enclensis: QNH15_00670
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Entry
QNH15_00670 CDS
T09077
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fec
Fictibacillus enclensis
Pathway
fec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QNH15_00670 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fec03021
]
QNH15_00670 (rpoC)
03400 DNA repair and recombination proteins [BR:
fec03400
]
QNH15_00670 (rpoC)
Enzymes [BR:
fec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QNH15_00670 (rpoC)
Transcription machinery [BR:
fec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QNH15_00670 (rpoC)
DNA repair and recombination proteins [BR:
fec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QNH15_00670 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WHY72509
LinkDB
All DBs
Position
126779..130399
Genome browser
AA seq
1206 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRDRMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDTGETPLEKKQLLSEKEYRSYREKYGQGFTAQMGAEAIRRLLE
DIDLVKEVDQLKEELKTAQGQRRTRAIKRLEVLEAFRHSGNEPHWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERVQPDVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMERAGAIGEGSVFKDANEAIVAYENGYVHLHTRIAVP
VSTLNKPSFKEHQQNMMLMTTVGKLLFNEILPESFPYINEPTTNNLQIETPEKYFLPQAA
NIKEEIAKHDEVDPFKKGILGKIIAEVFKRFKITETSKMLDRMKELGFKYSTRAGITVGV
SDIVVLPEKQVILEKAEEKVTTVTKQFRRGLITEDERYERVINIWSQAKDEIQQKLMLTL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGKIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLKVAAIKEGNEVIENLY
ERLVGRTAFRTVYHPETNEVLVSKNEQITEDSAQAVVDAGVQEVTLRSVFTCDTRHGVCK
KCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQALISELEGTVININESKEKREILVQGEIETRSYTVPYGARIKVAEGDVVTAG
QVLTEGSIDPKELIKVRGAEGVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRII
DAGHTDVLPGALVDIHTFTDANRKILLEGGIPATGRPVLLGITKASLETESFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLIPAGTGMSLYRNVGMDSPVSTDEETVGSEAT
ELVSQD
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgtaaacaattttgagtatatgaaaataggcctcgcttctccagacaagatc
cgttcctggtcaagaggagaagtgaaaaaaccagaaacgatcaactatcgtacattaaag
cctgaaaaagacggtttgttctgtgaacgaatttttggtccccaaaaggactgggaatgt
cattgcggaaaatacaaacgcgtccgttataaaggcgttgtatgtgatcgctgtggcgta
gaagtaactcgtgctaaagttcgacgtgaccgtatgggtcacatcgagcttgctgcacct
gtttcgcacatttggtatttcaaaggaataccaagccgtatgggtcttgtactcgatatg
tctccaagagcactggaagaagtcatttactttgcatcttacgtggtgacagatacgggt
gaaacgccgctggagaaaaaacagctgctttctgaaaaagaataccggtcataccgtgaa
aaatacggtcagggctttactgcacaaatgggagcggaagcgatccgccgtcttcttgaa
gatattgaccttgtaaaagaagtcgaccagctgaaagaagaattgaaaacagcgcaagga
cagcgccgtacccgtgcgattaaacgccttgaagtactggaagcgttccgtcattcagga
aacgagccacactggatgatcttggatgttcttcctgtcattccgcctgagcttcgcccg
atggtgcagcttgacggaggacgttttgccacatccgatttgaacgacttgtaccgccgt
gtgattaaccgtaacaaccgtttgaagcgtcttttggacttgggtgcgccgaacatcatc
gtacaaaacgaaaaacgtatgcttcaggaagcggttgatgcgctaatcgacaacggacgc
cgcggccgtcctgtaacagggccgggtaaccgtccattgaaatcactttctcatatgctt
aaagggaaacaaggccgtttccgtcaaaaccttcttggtaagcgtgttgactattccggc
cgttccgtaatcgtagtaggtcctcaccttaagatgtaccaatgtggtcttcctaaggaa
atggctcttgagcttttcaaaccatttgtaatgaaagagctcgtggccaaaggtcttgct
cataatattaagagtgcgaagcgcaaagtagagcgcgttcagcctgatgtatgggatgtg
cttgaagatgtaatcaaagagcacccggtacttttgaaccgtgcccctacgcttcacaga
ctgggtatccaggcattcgaaccaacgcttgttgaaggccgtgcgattcgtcttcacccg
ctcgtatgtacagcatacaacgctgactttgatggtgaccaaatggcggttcacgtacct
ttatccgctgaagcacaagctgaagcacgtttgctcatgctggctgcacaaaacattcta
aatccgaaagacggtaaaccggttgttacaccgtcacaggatatggtattgggtaactac
taccttacaatggagcgtgcaggtgcaattggtgaaggatctgtctttaaagatgcaaat
gaagcaatcgtggcgtacgaaaatggttatgtccatcttcatactcgtattgctgttcca
gtttcaactttaaacaaaccttcatttaaagaacaccagcaaaacatgatgttgatgaca
actgtcggtaaacttctcttcaacgagattcttccggagtcgttcccatacatcaatgag
ccgacaacaaacaacctgcaaattgaaacaccagagaaatacttccttcctcaagctgcg
aatattaaagaagaaatcgctaaacatgatgaagtagatccgttcaaaaaaggaattctc
gggaaaatcattgcagaagtatttaaacgattcaagattactgaaacatccaagatgctt
gaccgcatgaaagagcttggatttaaatattccacacgagctggtattaccgttggtgtt
tccgacatcgtcgtattgccggagaaacaggttatccttgaaaaagcggaagaaaaggtt
actacggtaacgaaacaattccgccgcggtctgattacagaagacgagcgatatgagcgc
gtcatcaacatctggagccaggcgaaggatgaaatccagcaaaaactgatgcttaccctt
gataagagaaacccgatcttcatgatgagtgactctggtgcccgtggtaacgcatctaac
tttacacagcttgccggtatgcgcggtctcatggccaacccggctggtaaaatcattgag
ttgccgatcaagtccagcttccgtgaaggtctgacggtactcgaatactttatctctaca
cacggtgcacgtaaaggtcttgccgatactgcactgaaaacagctgactccggttacttg
acacgccgccttgtagacgttgcacaggacgttattgtccgtgaggatgactgcggaact
gaccgcggccttaaagtggcagcgatcaaagaaggcaacgaagtaatcgagaacctatac
gagcgtcttgttggccgtacagccttcagaaccgtataccatccggaaacgaatgaagtt
cttgtcagcaaaaacgaacaaattacggaagactccgctcaggctgtagtcgatgccgga
gtgcaagaagtaacccttcgttccgtatttacatgtgatacccgtcacggtgtctgtaag
aaatgttacggccgcaacctggcaacaggctctgatgtcgaagttggggaagcggttggt
atcatcgctgcacaatccatcggggagccgggaacacagcttaccatgcgtaccttccat
acaggtggtgtagcaggagacgatatcacacaaggtttaccgcgtatccaggaattgttt
gaagcacgtaacccgaaaggtcaggcattgatttctgaacttgaaggtaccgtaattaac
atcaacgagtccaaagagaagcgtgagatccttgttcaaggtgaaatcgaaacccgttct
tacaccgttccatatggtgcccgcattaaagttgcagaaggcgatgtagtaactgccggt
caggtactgactgaaggttccattgacccgaaagaactgatcaaagtccgtggagcagaa
ggtgttcaggaatacttgctgcgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggcgacaagcacgtggaagtaatggttcgccagatgcttcgtaaagtccgtatcatc
gatgccggccataccgatgtattgcctggtgcgttggttgatattcatacctttaccgat
gcaaacagaaagattcttctcgaaggtggaattccggcaacaggacgtcctgtattgctt
ggtattaccaaagcatctcttgaaactgaatccttcttgtcagcagcatccttccaggaa
acaactcgtgtcctgactgatgcggcaatcaaaggtaagcgcgatgaattgctcggattg
aaagagaacgtaattattggtaaactgatccctgcaggtacaggtatgtccctataccgc
aacgttggaatggattctccggtctccactgacgaagaaactgtaggttcagaagcaaca
gagctagtctctcaagattaa
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