Fictibacillus enclensis: QNH15_06280
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Entry
QNH15_06280 CDS
T09077
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fec
Fictibacillus enclensis
Pathway
fec03420
Nucleotide excision repair
fec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNH15_06280 (helD)
03430 Mismatch repair
QNH15_06280 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fec03400
]
QNH15_06280 (helD)
Enzymes [BR:
fec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH15_06280 (helD)
DNA repair and recombination proteins [BR:
fec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNH15_06280 (helD)
MMR (mismatch excision repair)
Other MMR factors
QNH15_06280 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PhoH
Viral_helicase1
UvrD_C_2
AAA_30
SLFN-g3_helicase
nSTAND_NTPase5
DEAD
NPHP3_N
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WHY73516
LinkDB
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Position
1156230..1158566
Genome browser
AA seq
778 aa
AA seq
DB search
MNQWEKEWQTEQERVNSVVEKAAHKIRRLEAHLGGKKVDVVDIRKNFWEDVTVNLEDADE
AIETAASIKQQAELLSELERSHKNAEDQMKSLVRLSDSPYFGRIDFKEKSDSDSQPIYLG
IASFYDEEKDQFLVYDWRAPISSLYYDYSLGKAEYEAPGGVISGEMELKRQYIIRNAIIK
SMFDTGVTIGDELLQEVLSRQANPQMKSIVATIQKEQNQIIRNTKGSLLIVQGAAGCGKT
SAALQRVAYLLYRYRETLTANQIVLFSPNNVFNSYVSNVLPELGEENMMQTTFQQYIHHH
LGSSFHLEDPLEQMEAVLTAGEGPQDQTRLASIQYKASLDFMDMIEKHISRLRKEGIIFK
PIKFRGKVLIPAEEIKEKFYSYAPSVSIPNRMKLVSEWLVREVRKFEKAERNEPWVEEKI
QLLEKDVYVKLYQKLQKKKQYSENTFNDFEREQKLLSAYVVSRAFKLLKKRIKALTFINL
KALYMALFKEDGVVSPAEVPSRWKEICLLTAKTLAQGELYYEDATPFLYLKERMEGFQTN
TAVRHVFIDEAQDYSPFQFAFIQRLFPRSKMTVLGDLNQSIYAHSTGDAFQMLYDRFGRE
NTEQIILTRSYRSTRQIVEFTRELLDEPDKVVPFNRDGEKPVLKQFSVSRDHSRSVADTI
AHLQNEKVKTIAVICKTEQECKEAYEALKEQVEVELMLKESSAFKQGTLIIPSYLAKGIE
FDAVLVYDASNEVYGKESERKLFYTVCTRAMHELHLFAKGDLSPFFERIPEDTFHAEN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtgggaaaaagaatggcagacagagcaggagcgtgtgaattccgttgttgag
aaggctgctcataagatccggaggctggaggcacatctcggcggtaaaaaagtagacgtg
gttgacatccggaaaaatttctgggaagacgtgaccgtcaatttagaagatgccgatgaa
gcgatcgagactgcggccagcattaaacagcaggcggaattgctttcagaacttgaacgc
agccacaaaaatgcagaagatcaaatgaaaagcctggtgcgcttgagtgattctccctac
tttggaagaatcgactttaaagagaagagtgattccgattctcagccgatttaccttggc
attgcctctttttatgatgaagaaaaggatcaatttttggtatatgattggcgggcgccc
atttcaagcctgtattatgactattctctgggcaaggcggaatacgaagctcctggcggt
gttatttcaggtgagatggagcttaagcgccaatatatcattcgaaacgctatcatcaaa
agcatgtttgatacgggtgtaaccattggtgatgaattgcttcaggaagtattgagccgt
caggcgaacccgcagatgaaaagtattgtggcgaccattcagaaagagcagaaccagatt
attcgaaacacgaaggggtccctgttgatcgtccagggtgctgcgggatgcggaaaaacc
tccgccgcccttcagcgtgtggcttacctgctataccgttacagagaaacgctgacagcc
aaccaaatcgttcttttttctccaaacaacgtatttaacagttatgtatccaatgtcctt
cctgagctcggtgaggaaaatatgatgcaaacgacgtttcagcagtatattcaccatcat
ttgggcagctcctttcaccttgaggatccgctcgaacaaatggaagcggtgctgacagct
ggagagggtccacaggatcagacaaggctggccagtatccaatacaaagcgtctctggac
tttatggatatgattgaaaagcacatttctcgtcttcgtaaagagggaataatctttaaa
ccgatcaaattcagggggaaagtactcatcccggctgaggagattaaagaaaagttttat
tcctacgctccatcggtctcgattccgaaccggatgaaactcgtatccgaatggctggtc
cgtgaggtgcgcaaattcgaaaaagccgaaagaaatgaaccgtgggtagaggaaaaaata
cagctgctcgaaaaggatgtatacgtaaagctgtatcaaaaactgcaaaagaaaaagcag
tactcagaaaatacattcaacgattttgaaagagagcaaaagctgttatcggcttatgtc
gtatcaagagcatttaagctgctgaagaaaaggattaaagctttaactttcattaattta
aaagcactctatatggcgttgttcaaagaggatggagtggtttcacctgcagaagtcccg
tccagatggaaagaaatatgcctgcttactgcaaaaactcttgcccagggagaattgtat
tatgaagatgctactccatttttatatttaaaagaacggatggaaggctttcagactaat
acggctgtaagacatgtattcattgatgaagcccaggattattcaccgtttcagtttgcc
ttcatacaacggctgtttccgcggagcaaaatgacagtactgggggatttaaaccaatcc
atctatgcgcattccacaggagacgcttttcaaatgctgtacgaccgttttggcagggag
aatacagagcagattattctgaccagaagctaccggtcaacaaggcagattgtagagttt
acaagagaactgctggatgaaccggataaggttgttccattcaacagggatggagaaaag
ccggtactgaagcaattttccgtttctcgtgaccattcccgctcagttgcagatacgatt
gcgcatcttcaaaacgagaaggttaaaacgattgccgtcatttgcaaaaccgaacaggag
tgcaaagaggcgtatgaagcattgaaggaacaggtggaggtagaattgatgctgaaagaa
tcgtccgcgtttaagcaaggaacactgatcatcccgtcctatctcgccaaagggattgaa
tttgatgctgttcttgtttatgatgcgtcaaacgaagtgtatggaaaagaaagcgaacga
aaattgttttataccgtttgcacccgtgctatgcatgaactacatcttttcgccaaagga
gacctttcgccgttttttgaacgaattcctgaggatacctttcatgctgaaaactaa
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