Fictibacillus enclensis: QNH15_15535
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Entry
QNH15_15535 CDS
T09077
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fec
Fictibacillus enclensis
Pathway
fec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNH15_15535 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fec03021
]
QNH15_15535 (rpoD)
Transcription machinery [BR:
fec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNH15_15535 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
BACOVA_00961-like
Motif
Other DBs
NCBI-ProteinID:
WHY70472
LinkDB
All DBs
Position
complement(2948161..2949285)
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AA seq
374 aa
AA seq
DB search
MAEKPNRQETEGELTIDQVKEQLIEAGKKNGVLTYTVITNKLAPFDQDSEQMDEFYNFLE
EQGVEVSDETDGDEEEPKFEAGKEEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLSA
EEEISLAKRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEK
FDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREP
TPEEIGAEMELTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDALAPSEAAAYE
LLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKRLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccaaaccgtcaggagacggaaggcgaattaaccatcgatcaagtaaaa
gagcaactaattgaagcaggtaaaaagaacggggtgctgacgtataccgtcatcacaaat
aaactggctccttttgaccaggattccgaacaaatggatgagttctacaacttccttgaa
gaacaaggggtagaagtttccgatgaaaccgatggcgatgaggaagagccgaaatttgaa
gccggtaaagaagaagaggaatttgacctcaacgacttgagtgttcctccaggtgttaaa
ataaatgaccccgtcaggatgtacctgaaagagatcggccgtgtggaccttctttccgct
gaagaagagatttcccttgccaagcgaattgaagaaggagacgaggaagcaaaacgccgt
ctggcggaagccaacctcaggctcgttgtcagtattgccaaacggtacgtaggccgcgga
atgctctttcttgacctgattcaagaaggtaacatgggattgatcaaagccgttgaaaaa
tttgattaccgtaaaggatataagttcagtacttatgccacatggtggatcagacaggcg
attacccgtgcgatagcggaccaggcaagaaccatccgaattcctgttcacatggttgaa
accatcaataaactgatccgtgtccagcggcagcttcttcaggatttgggccgtgaacca
actccggaagaaattggagcagaaatggaacttacacctgacaaggtgcgtgagatcttg
aaaatagctcaagaacctgtatctctggaaacaccgatcggggaagaggatgattcccat
cttggtgattttattgaagaccaggatgctcttgctccttcagaggcagccgcttatgag
ctcttaaaggaacagctggaagacgttcttgatacccttactgacagggaagagaacgtg
cttcgcttacgattcggcctagatgacgggcgtacaagaacgctcgaggaagtcggcaaa
gtgtttggtgttacacgtgaacggatccgccaaatcgaagcaaaagctcttcgtaaactt
cgtcacccaagccgaagcaaaagactcaaggacttcttggaatag
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