Fictibacillus enclensis: QNH15_20930
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Entry
QNH15_20930 CDS
T09077
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
fec
Fictibacillus enclensis
Pathway
fec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH15_20930 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fec03019
]
QNH15_20930 (rnr)
03016 Transfer RNA biogenesis [BR:
fec03016
]
QNH15_20930 (rnr)
Enzymes [BR:
fec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QNH15_20930 (rnr)
Messenger RNA biogenesis [BR:
fec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNH15_20930 (rnr)
Transfer RNA biogenesis [BR:
fec03016
]
Prokaryotic type
tRNA degradation factors
QNH15_20930 (rnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
OB_PDCD11
OB_HELZ2
S1_RRP5
OB_RNR_1st
HTH_NPRL3
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WHY71443
LinkDB
All DBs
Position
complement(4005235..4007535)
Genome browser
AA seq
766 aa
AA seq
DB search
MNKQQLLAFMKEEAYKPLTVQELEDAFGLQEADDFKILVRTLNEMEDEGLVVRTRTNRYG
LPDKMNLVRGKVQAHAKGFAFVLPETGEGKDVYVSQGDMGSAMNNDVVLVRLNTNSKGSH
PEGTIIRILERGVTETVGTFQQSRSFGFVVADDKRIPNDIFIPAEGVNGAIEGHKVVVKI
TKYPEGRNSAEGEVIHILGHKNDPGVDILSVIFKHGLPREFPEEVLEQANSVPDTIDPND
IEGRRDLRDQTIVTIDGEDAKDLDDAVNVIKLDNGNYKLGVHIADVSHYVTEGSPIDEEA
LERGTSVYLVDRVIPMIPHRLSNGICSLNPRVDRLTLSCEMEITPKGEVIKHEIFPSVIK
TVERMTYTNVRKILQREDDEVLKRYEPLIPFFDGMGELAEILRKRRFNRGAIDFDFSEAR
VIVNDNSEPQEVVLRERSVAERLIEEFMLCANETVAQHFHKADLPFMYRIHEDPDAEKLH
RFLEFIAMFGYVLKGEVEDVHPRSLQKLLEEVKGEPEEMVISKIMLRSMKQAKYYPESLG
HYGLATEFYTHFTSPIRRYPDLIVHRLIRTYLINKKTDPSTVAKWKGQLEKIAKHASDRE
RRAVDAERETDDLKKAEFMQDKIGEEYDGVISSVTNFGLFVELPNTIEGLVHVSYLADDY
YRYDEKHMAMIGERTGNVFRIGDELAVRVINVNLDERAIDFEIVGMKGTPRKRGKDRPKV
IEGEGRKRKTRRPEADRGDKGGSTKGKKKPFYKGNITKKKKKNKKR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagcagcaactgctcgcattcatgaaagaagaagcatataaaccgcttaccgtt
caggaactggaagacgcctttgggctccaggaagcggatgattttaaaattttagttcgc
acactgaacgagatggaagacgagggacttgttgtcagaacaagaacaaaccgatatggt
cttcctgacaaaatgaatcttgttcgaggaaaggtgcaggctcatgcgaaagggtttgct
ttcgtcctccctgaaacaggagaaggaaaagacgtctacgtttctcagggagacatgggc
agtgccatgaacaatgacgtggtgctcgtacgccttaacaccaattcaaaaggctcacat
ccggaaggtaccattatccgcattctggagcgtggtgtaacagaaacagtaggaaccttc
cagcaaagccgcagttttgggtttgtggtcgctgatgacaaacggattccaaatgatatt
ttcatcccggctgaaggggtaaatggtgccattgaaggccataaagtcgttgttaaaatc
accaagtaccctgaagggcgaaacagtgcagaaggagaagtcatccacattctcggccat
aaaaacgaccccggcgtggatatcctttccgtcattttcaaacacgggctgccaagagag
ttccctgaagaggtgcttgaacaggcaaacagtgtgcctgacaccattgatccgaatgat
atcgaaggccgccgcgatctgcgcgaccaaaccatagtaaccatcgatggcgaagatgct
aaggatttggatgatgctgttaatgtgatcaagcttgataacggcaattataaactcggt
gtccatatcgctgatgtcagtcactatgtaactgaaggatcaccaatcgatgaggaagcg
ttggaacggggtacaagtgtgtatctcgtagaccgggttattccgatgattcctcaccgc
ctgtccaacggaatctgttcattgaatccgcgggtggaccgcctgacgctttcctgtgag
atggaaatcacgcctaaaggcgaagtaattaagcatgagattttcccgagtgtgatcaaa
actgttgaacggatgacctacacgaacgttcggaaaatccttcagcgtgaagacgatgaa
gttttaaaaaggtatgagccgctaattccgttttttgatggaatgggcgaactggccgaa
attctgcgcaagcgccgatttaaccgaggtgctattgacttcgatttcagtgaagcccgt
gttatcgtcaatgataatagcgagccgcaggaagtggtgcttcgcgaacggtcggtagcg
gaacgcctgatcgaggagttcatgctgtgtgccaatgaaacagtagcccagcacttccat
aaagctgatcttccgtttatgtatcggatccatgaagatccggacgcagagaaacttcac
cgttttctcgaattcatcgccatgttcggctatgtactgaagggcgaagtggaagacgtc
catccgcgttcactgcaaaagcttttagaagaagtaaaaggcgagccggaagaaatggtg
atcagcaaaatcatgctccgttccatgaagcaggcgaaatactatccggaaagcctgggc
cactatggactcgcaacagaattttatacgcatttcacttcaccgatccggcgttacccg
gatttgatcgttcaccgcttgatccgaacgtatcttatcaacaaaaagaccgatccaagc
acggtggcaaaatggaagggacagcttgagaaaatcgccaagcatgcttccgacagggaa
cgccgcgcggtggatgccgagcgtgaaactgatgatctgaaaaaagcagaattcatgcag
gataaaatcggggaagagtatgatggtgtcatcagttccgtaaccaactttgggttgttt
gtggaacttccgaataccattgaaggtctcgtacatgtgagctatctggctgatgattac
taccgctatgatgagaagcatatggccatgatcggtgagcgtacaggaaacgtgttccgg
atcggggatgaactggctgtaagagtcatcaatgttaaccttgatgagcgggcgattgat
tttgagatcgtgggtatgaagggaacacctcggaaacggggaaaagaccgtccaaaagtc
atcgaaggcgaaggacgaaagcgaaaaacacgccgtcctgaagccgaccgaggggacaaa
ggcggatcaacaaaaggcaagaaaaagccattctataaagggaatatcacgaaaaagaaa
aagaagaacaaaaagagataa
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