Frateuria edaphi: LQ772_00005
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Entry
LQ772_00005 CDS
T08888
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
fed
Frateuria edaphi
Pathway
fed00550
Peptidoglycan biosynthesis
fed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ772_00005 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fed01003
]
LQ772_00005 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
LQ772_00005 (pbpC)
Enzymes [BR:
fed01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LQ772_00005 (pbpC)
Glycosyltransferases [BR:
fed01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LQ772_00005 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LQ772_00005 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UGB45719
LinkDB
All DBs
Position
join(3767538..3769403,1..513)
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AA seq
792 aa
AA seq
DB search
MQRWLRATALALVALLLAALILDRLFPLPLPAPDTGSTVVLARDGTPLRAFADSDGVWRY
PTTTAKVSPLYRQALLAYEDRWFYRHPGVNPYALLRGALQGALHGHVVSGGSTLTMQVAR
IIEPIPHSFGGKLRQIFRALQLEAHLDKTQILDLYLDNAPFGSTIEGVEAASWAYLGKSA
SRLSRAEAALLAVLPQAPSRLRPDRHPEAARAARDKVLRRLRDEGVWTSEQVSDAAIEPV
VARSLRVPLAAALLAERLHRQQPRARRIVTTIDANLQRAAEDHVAGYLARLPPRSSVAVL
AVDNATLEARIYIGTGEFADPERAGHVDMVRAPRSPGSTLKPFLYGLALDDGLVTSESLL
VDAPQDFGGYHPGNFDEAFSGPVSVSEALQRSLNVPAVDMLDRVGPNRFVARLASGGVEL
QLPDGARPNLSIILGGTATRLENLVGGYSAFANAGIAGAPRYTPDQPARPRRLLSPGAAW
IIRDILASNPADVEGAPMEGTIDRHATVAWKTGTSYGYRDAWAIGVTDRWTVGVWIGRPD
GTPSPGQYGAVTALPLLFQLTDMLPARGGVHAPRPASVRAVDICWPLGEPAERTAAPLCR
QRRSAWTLDGAQPPTFAERDPGAWMSGRIGLRLDARGRRLSAGCHAPHEHRTSLARWPAL
ATPWLAAADREASTLPPLAPGCAADSLAVATPIRIIGLRDGATLRQAPNGSGPLRLAVRA
LGGPGDVQWLLDGRLQGSTRGDGSITLGLREPGQHALTALAGDGAWESVRFTVLGSPDRG
PEARGLRPRANR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctggctgcgcgctacggctctcgccctggtcgcgctcctgctcgccgcgctc
atccttgatcgcctgtttcccctcccgctcccggcccccgacaccggcagcaccgtggtg
ctcgcccgcgacggcacgccgctacgcgccttcgccgacagcgacggcgtgtggcgctat
cccacgacaactgccaaggtctcgccgctctatcgccaggcgctgctcgcctacgaggac
cgctggttctaccgccaccccggcgtgaacccttacgccttgctgcgcggcgcgctgcag
ggcgcgctacacggtcacgtcgtctcaggcggctccacgctgacgatgcaggtggcgcgc
atcatcgagccgatcccgcacagcttcggaggcaagctgcgccagatcttccgcgcgctg
cagctcgaagcccacctcgacaagacccagatcctcgatctctacctcgacaacgcaccc
ttcggcagcaccatcgaaggcgtcgaggccgcctcgtgggcgtacctcggcaagagcgcg
agccgcctgtcgcgcgctgaggcggccctgctcgcggtgctgccgcaggcgcccagccgg
ctgcggccggaccgccacccggaggcggcccgcgccgcgcgcgacaaggtgcttcgccgg
ttgcgcgacgaaggcgtctggacgtccgaacaggtcagtgacgcggcgatcgagccggtg
gtcgcgcgctcgctgcgcgtgccgctcgccgccgcgctgctggccgaacgcctgcaccgg
cagcagccgcgcgcgcggcgcatcgtcaccaccatcgacgccaacctgcagcgcgccgcg
gaggaccacgtcgccggctaccttgcccggctgcccccacgaagttcggtcgcggtgctc
gcggtggacaacgccacgctcgaagcgcgcatctacatcggcaccggcgagttcgccgat
ccggagcgcgccggccacgtcgacatggtgcgcgcgccacgatcgccagggtccacgctc
aagcccttcctgtacggcctggcgctggacgacgggctggtcacatccgaaagcctgctg
gtggacgcgccgcaggacttcggcggctatcacccgggcaacttcgacgaggctttcagc
ggtccggtcagcgtgagcgaagctttgcagcgctcgctcaacgtgccggcggtcgacatg
ctcgatcgcgtcggccccaaccgcttcgtcgcgcgtctggccagcgggggcgtcgagctg
cagcttcccgacggcgcacggcccaacctgtcgatcatcctcggcggcaccgccaccagg
ctggaaaacctcgtcggcggctacagcgcgttcgccaacgccggcatcgccggcgccccg
cgctacacgccggaccagcctgcccgcccgcggcgcctgctctcgcctggcgccgcctgg
atcatccgcgacatcctggccagcaaccctgccgacgtcgaaggcgcgccgatggaaggc
accatcgaccggcacgccacggttgcctggaaaaccggcaccagctatggctaccgcgac
gcctgggcgatcggcgtgaccgaccgctggaccgtcggcgtgtggatcggtcgcccggac
ggcacgccctcgcccggccagtacggcgccgtcaccgcgctgccgctgctgttccagctc
accgacatgctgcccgcccgcggcggcgtgcatgcgccgcgaccggccagcgtgcgcgcg
gtcgacatctgctggcccctgggcgaacctgccgagcgcaccgccgccccgctgtgccgc
cagcggcgttccgcctggaccctcgacggcgcccagccaccgacctttgccgaacgcgac
cccggcgcatggatgagcggccgcatcggcctgcgcctcgacgccaggggccgacgcctc
agcgcgggatgccacgcgccgcacgagcaccgaacaagcctcgcccgctggcccgcgctc
gccaccccgtggcttgccgccgccgaccgcgaggcctccacgctgccgccgctcgccccc
ggctgcgccgcggactccctcgcggtcgcgactcccatccgcattatcggcttgcgcgac
ggcgccaccctgcgccaagcccccaacggcagcggccctctgcgcctcgccgtccgcgcg
ctgggcggcccgggcgacgtgcaatggctcctcgacggccgcctgcagggcagcacccgg
ggtgatgggtcgatcaccctcggcctgcgtgaaccgggccagcacgcacttaccgcgttg
gcgggcgacggtgcgtgggagagcgtgagatttaccgtgctgggctcgccggaccgtgga
ccggaagcgcggggattgcgtcctcgggcaaaccgctag
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