Frateuria edaphi: LQ772_00125
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Entry
LQ772_00125 CDS
T08888
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fed03009
]
LQ772_00125 (rsmB)
Enzymes [BR:
fed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LQ772_00125 (rsmB)
Ribosome biogenesis [BR:
fed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LQ772_00125 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_37
FtsJ
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
UGB45742
LinkDB
All DBs
Position
complement(23007..24302)
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AA seq
431 aa
AA seq
DB search
MTDTRALAATALAEIALRGTSLREAMERHAPKLPDPRDRALLMALLSEGARWWLRFDPAL
DRLLAQPLRRKEPQVHALLVLGLVQLEILQLQDYAAVAATVEATRALKRPRLAGLVNAVL
RRWQRERTDLLAALDASPPTRHAHPPWLADAIARDWPIHAETVLAADNIEPPLMLRANRR
VTTREALLERLHLDGQTASAHPWLVDAIMLPHSGDITRLSGFASGEFAVQDGAAQVAADL
LDARPGQRVLDACAAPGGKACHVLERSDLALTALDSDPVRLRRIGQNLDRLGLHATLLAG
DAAAPEVWWDGQPYDRILIDAPCSATGVLRRRPDVRLHRRESDIPALAALQQRILGALWP
LLKPGGKLVYATCSLLRAENEAAVQSLLATAADARPLPFALPTGQAAAVGWQILPGDGDL
DGMYYAVLVKQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacccgcgccctcgccgccaccgcgctggcggaaatcgccctgcgcggcacc
tcgctgcgcgaggcgatggagcgccacgcgccgaaactccccgatccacgcgaccgcgcc
ctgctgatggccctgctcagcgaaggcgcgcgctggtggcttcgcttcgatcccgcgctc
gaccgcctgctggcccagccgctgcgccgcaaggagccgcaggtacacgcgctgctggtg
ctcgggctggtgcagctggagatcctccagttgcaggattacgccgcggtggccgccacc
gtcgaggccacccgcgcgctcaagcgcccgcgcctggccgggctggtcaacgccgtgctg
cgccgctggcaacgcgagcgcaccgacctgctggccgcgctcgacgcctcgccgccgacc
cgccacgcgcatccgccctggctggccgacgccatcgcccgcgattggcccatccacgcc
gagacggtcttggcagccgacaacatcgaacctccgctgatgctgcgcgccaaccgtcgg
gtcaccacccgcgaggcgctgctcgaacggttgcacctggacggccagaccgcgtcggcg
cacccatggctggtcgatgccattatgctcccccacagtggggacatcacccggctttcc
ggcttcgcttcaggcgaattcgcggtacaggacggcgccgcccaggttgccgccgacctc
ctcgacgcccgccccggccagcgcgtgctcgatgcctgcgccgcgcccggcggcaaggcc
tgccacgtgctcgagcgcagcgacctggcgctgaccgcgctggattcggatccggtccgc
ctgcgccggatcggtcagaacctggaccggctcggcctgcacgccacgctcctggccggc
gatgccgccgcgccggaggtttggtgggacggccagccctacgaccgcatcctcatcgac
gcgccctgctcggctaccggcgtgctgcgccgccggccggacgtacggctgcaccggcgc
gagagcgacatccccgcgctggccgccctgcagcaacgcatcctcggcgcgttgtggcct
ctgctcaagccgggcgggaagctggtctacgcgacctgctcgctgctgcgcgcggaaaac
gaagcggcggtgcagtccctgctcgccaccgccgctgacgcgcgcccactgccgtttgcc
ttgccgacgggccaggccgccgcggtcggctggcagatcctgcccggcgatggcgacctg
gacggcatgtactatgccgtcctcgtaaagcagtaa
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