Frateuria edaphi: LQ772_00610
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Entry
LQ772_00610 CDS
T08888
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07729
putative transcriptional regulator
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fed03000
]
LQ772_00610
Transcription factors [BR:
fed03000
]
Prokaryotic type
Helix-turn-helix
Other families
LQ772_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_25
Sigma70_r4
HTH_23
HTH_26
HTH_11
Sigma70_r4_2
HTH_24
HTH_20
MarR_2
HTH_37
HTH_7
HTH_8
YdaS_toxin
HTH_38
HTH_Crp_2
HTH_28
HTH_29
Terminase_5
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UGB45835
LinkDB
All DBs
Position
121856..122047
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AA seq
63 aa
AA seq
DB search
MKNQVRDLRGGQGWSQADLAERLDVSRQTVNAIETGKYDPSLPLAFKIARLFGRPIENIF
EPD
NT seq
192 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccaggtgcgcgacctgcgcggcgggcagggatggtcgcaggcggacctggcc
gagcggctggacgtttcgcgccagaccgtcaatgccatcgagaccggcaaatacgacccc
agcctgccgctcgccttcaagatcgcgcgtctcttcgggcgaccgatcgagaacatcttc
gagccggattga
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