Frateuria edaphi: LQ772_00750
Help
Entry
LQ772_00750 CDS
T08888
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fed03021
]
LQ772_00750 (rpoH)
Transcription machinery [BR:
fed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LQ772_00750 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
GntR
UCR_14kD
Phage_terminase
Ntox28
Motif
Other DBs
NCBI-ProteinID:
UGB45862
LinkDB
All DBs
Position
152596..153447
Genome browser
AA seq
283 aa
AA seq
DB search
MSQALVTANLPIPSVVGSLDAYISAVHRIPVLSHDEEQALARRFNEEDDLGSARKLVMSH
LRFVVHVARGYSGYGLQLGDLIQEGNIGLMKAVKRFDPDQGVRLVSFAVHWIRAEMHEFI
LRNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNAEEVRVVARDLGVPEATVREMESRLSG
RDIGFEAPADADDDAKPAPAAFLVDDGADPYDNVSDADQADNQLETLSSALAKLDERSRD
IIQRRWLNEDKATLQDLADEYGVSAERIRQVEANAMKKMRALF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagccttggtgaccgccaacctgccgatccccagcgtcgttggcagtctggac
gcctatatttccgccgtgcaccgcatcccggtgctcagccatgacgaggagcaggcgctg
gcgcgccgcttcaacgaagaagacgacctgggttcggccaggaagctggtgatgtcgcac
ctgcgtttcgtggtgcacgtggcccgtggctactcgggctacggcctgcagctgggcgac
ctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgcttcgacccggaccag
ggcgtgcgccttgtcagcttcgcggtgcactggattcgcgccgagatgcacgagttcatc
ctgcgcaactggcgcatcgtcaaggtcgccaccaccaaggcgcagcgcaagctgttcttc
aacctgcgcaagagcaagaagcgcctgggctggatgaacgccgaggaagtgcgcgtcgtg
gcccgtgacctgggcgtgccggaggcgaccgtgcgcgagatggaatcgcgcctgtccggc
cgcgacatcggcttcgaagcgcctgccgacgcggacgacgatgccaagccggcaccggcg
gccttcctggtcgacgacggcgccgatccgtacgacaacgtgtccgacgccgaccaggcc
gacaaccagctggagacgctctccagcgcactggccaagctggacgaacgctcgcgcgac
atcatccagcgccgctggctcaacgaggacaaggccacgctgcaggatctggccgacgag
tacggtgtttcggccgaacgcatccgtcaggtcgaggcgaatgcgatgaagaagatgcgc
gccctgttctga
DBGET
integrated database retrieval system
