Frateuria edaphi: LQ772_01010
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Entry
LQ772_01010 CDS
T08888
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
fed
Frateuria edaphi
Pathway
fed00010
Glycolysis / Gluconeogenesis
fed00020
Citrate cycle (TCA cycle)
fed00260
Glycine, serine and threonine metabolism
fed00280
Valine, leucine and isoleucine degradation
fed00310
Lysine degradation
fed00380
Tryptophan metabolism
fed00620
Pyruvate metabolism
fed00630
Glyoxylate and dicarboxylate metabolism
fed00640
Propanoate metabolism
fed00670
One carbon pool by folate
fed00785
Lipoic acid metabolism
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01120
Microbial metabolism in diverse environments
fed01200
Carbon metabolism
fed01210
2-Oxocarboxylic acid metabolism
fed01240
Biosynthesis of cofactors
Module
fed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
fed_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
fed_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
fed_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LQ772_01010 (lpdA)
00020 Citrate cycle (TCA cycle)
LQ772_01010 (lpdA)
00620 Pyruvate metabolism
LQ772_01010 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LQ772_01010 (lpdA)
00640 Propanoate metabolism
LQ772_01010 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LQ772_01010 (lpdA)
00280 Valine, leucine and isoleucine degradation
LQ772_01010 (lpdA)
00310 Lysine degradation
LQ772_01010 (lpdA)
00380 Tryptophan metabolism
LQ772_01010 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LQ772_01010 (lpdA)
00670 One carbon pool by folate
LQ772_01010 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fed04147
]
LQ772_01010 (lpdA)
Enzymes [BR:
fed01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LQ772_01010 (lpdA)
Exosome [BR:
fed04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LQ772_01010 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Biotin_lipoyl_2
Pyr_redox_3
GIDA
NAD_binding_8
AlaDh_PNT_C
FAD_binding_3
FAD_binding_2
GCV_H
HI0933_like
TraI-like_C
Thi4
RnfC_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UGB45914
LinkDB
All DBs
Position
215228..217075
Genome browser
AA seq
615 aa
AA seq
DB search
MANTIEVKVPDIGHDNVPVIEVLVKAGDRVEKEQSLITLESDKATMEVPSSAAGVVRDVK
VKVGDEVSEGAVILTLEAEASAPSAPDGNKAGEEGQGKGAPSRQPGNEANAPTAAPASPA
PSPQSPPRRGEEAKVPHAAAASSRTPDLECKLVVLGSGPGGYTAAFRAADLGVDTVLVER
YASLGGVCLNVGCIPSKALLHAAAVIDEADAMAAHGVTFGKPKIELDKLRKFKDQVVGKL
TGGLAGMAKQRKVRTVQGTGSFVSPHELEVKTAEGTRLIRFEHAIIAAGSQAVRLPMFPW
DDERVMDSTGALELKDIPKQLLVVGGGIIGLEMATVYAGLGSEVTVVEFMDQLIPGADVD
LVKPLAKRLGGKLKGVHLKTKVVEAKATKKGIEVRYEGDSIPDTTVFDRVLVAVGRSANG
NKIGADKAGVAVTDRGFINVDTQLRTNVPHIFAIGDLVGQPMLAHKATHEARVAAEVVAG
MKSHFDARVIPSVAYTDPEIAWVGVTEREAKEKGLKVGVGKFPWAASGRAIGIDRTEGFT
KLLFDEETHRVVGAGIVGPHAGDLISELALAIEMGAEAADIALTIHPHPTLSESIAMAAE
VYEGTITDLYIPKKK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacgatcgaagtgaaagtccccgacatcggccacgacaacgtgccggtgatc
gaggttctggtgaaagccggcgaccgcgtggagaaggaacagagcctgatcacgctggag
tcggacaaggccacgatggaagtgccttccagcgccgctggcgtggtcagggacgtcaag
gtgaaggtgggcgacgaggtgtccgagggcgcggtgatcctcacgctcgaagccgaggct
tctgctccctctgccccggatggaaacaaggcgggggaagagggccagggtaagggggcg
ccctcgcgacagcccggcaacgaagcgaacgcacctaccgccgctcccgcaagccccgcc
ccctcaccgcaatcccctccccgccggggagaggaagcgaaggtgccgcacgcggcagcg
gcatcgtccagaacacctgacctcgaatgcaagctcgtcgtcctcggctcgggccccggc
ggctacaccgccgcgttccgcgccgcggacctgggcgtcgacaccgtgctggtcgaacgc
tacgcgagcctgggcggcgtctgcctcaacgtcggttgcatcccgtcgaaggcactgctg
cacgccgcggccgtgatcgacgaggccgacgcgatggccgcccacggcgtcaccttcggc
aagcccaagatcgagctcgacaagctgcgcaagttcaaggatcaggtggtcggcaagctc
accggcgggctggccggcatggccaaacaacgcaaggtgcgcaccgtgcagggcacgggc
agctttgtctctccgcacgagctggaagtaaagacggccgagggcaccaggctgatccga
ttcgagcacgccatcatcgccgccggctcgcaggccgtgcgcctgccgatgttcccgtgg
gacgacgagcgcgtgatggattccaccggcgcgctggagctgaaggacattccgaagcag
ctgctggtcgtcggcggcggcatcatcggcctggagatggccacggtgtatgcgggcctg
ggcagcgaagtgaccgtggtcgagttcatggaccagctgatccccggcgccgacgtggac
ctggtcaagccgctggccaagcgcctcggcggcaagctcaagggcgtgcacctgaaaacc
aaggtggtcgaggccaaggccaccaagaagggtatcgaagtccgctacgaaggcgacagc
attcccgacaccaccgtgttcgaccgcgtgctggtcgccgtgggccgctccgcaaacggc
aacaagatcggtgccgacaaggcgggcgtggcggtgaccgatcgcggcttcatcaacgtc
gacacgcagctgcgcaccaatgtgccgcacatcttcgccatcggcgacctggtcggccag
ccgatgctggcgcacaaggcgacccacgaggcgcgcgtcgccgccgaagtggtggccggc
atgaagagtcatttcgacgcccgcgtgatcccgtcggtcgcctacaccgacccggaaatt
gcctgggtcggcgtgaccgagcgcgaggcgaaggaaaagggtctcaaggtcggcgtgggc
aagttcccctgggccgcctccggccgcgcgatcggcatcgaccgcaccgaaggcttcacc
aagctgctgttcgacgaggaaacccaccgcgtggtcggcgcgggcatcgtcggcccgcac
gccggcgacctgatctccgagctggccctggccatcgagatgggtgccgaggcggccgac
atcgccctgaccatccacccgcacccgaccttgagcgagtcgatcgcgatggcggcggag
gtctacgagggcaccatcacggacctgtacatcccgaagaagaaatag
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