Frateuria edaphi: LQ772_01230
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Entry
LQ772_01230 CDS
T08888
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fed
Frateuria edaphi
Pathway
fed00300
Lysine biosynthesis
fed00470
D-Amino acid metabolism
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01120
Microbial metabolism in diverse environments
fed01230
Biosynthesis of amino acids
Module
fed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LQ772_01230 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LQ772_01230 (lysA)
Enzymes [BR:
fed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LQ772_01230 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UGB45957
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All DBs
Position
complement(273602..274891)
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AA seq
429 aa
AA seq
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MTVSSRHDDTASVPDPQPTFDGVDLQALASRLGTPLYAYSANAIRGRIGELQSALHGLDA
TICYAVKANSNRAILELMAAAGLGADIVSAGEMQRALAAGIPANRIVFSGVGKTKGEIAA
ALAAGVARFNVESLDELHAIERVAAARRVVANAAVRINPDVDALTHAKISTGRAENKFGV
SIAEARRWFAERRQLPHVRLDGLHVHIGSQILDLEPFRLALNRVASFWRELLHAGHPIAS
IDVGGGLGVRYRAGHDRPVAAGDYANVVREALAGFEGRLLLEPGRYLVAEAGVLLTRVLR
IKEGTERSFLVLDAAMNDLQRPSLYDAWHDIVPVAPDPRPLATYDVVGPVCETGDTFARA
RVLPACQPGDLLAIQGTGAYGASMASTYNSRPLAAEVLLDDGRYAVIRRRQTLEEMVAGE
QSAQDWATP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctcctcccggcacgacgacaccgcgtccgtgcccgacccgcaaccgaccttc
gatggcgtggacctgcaggcgctggcctcgcgactgggcacgccgctgtatgcctactcg
gccaacgcaatccgcgggcggatcggcgaactccagtctgccctgcacggcctggacgcc
accatctgctacgcggtcaaggccaacagcaaccgcgccatcctcgaactgatggccgcc
gccgggctgggcgcggacatcgtttccgccggcgaaatgcagcgcgccctcgccgcgggc
atcccggccaaccgcatcgtgttctccggcgtcggcaagaccaagggggagatcgccgcg
gcgctcgccgccggcgttgcgcgcttcaatgtcgaatcgctggacgagctgcacgccatc
gagcgggtggccgccgcacgacgcgtggtggcgaacgccgcggtgcgcatcaacccggac
gtcgatgcgctcacccacgccaagatttccaccggccgcgccgagaacaagttcggcgtg
agcatcgccgaggcgcgccgctggttcgccgaacgccggcaactgccgcacgtgcggctg
gacggcctgcacgtgcacatcggctcgcagatcctcgacctggaacccttccggctggca
ttgaaccgcgtcgcgtcgttctggcgcgaattgctccatgccggccacccgatcgccagc
atcgacgtcggtggcggcctcggcgtgcgctaccgcgccggccacgaccggcccgtcgcc
gccggcgactacgccaacgtggtccgcgaggcactggccggcttcgagggccgcctgctg
ctggagcccggccgttacctggtggcggaggccggcgtgctgctcacccgtgtgctgcgc
atcaaggaaggtaccgagcggtccttcctggtactcgatgcggcgatgaacgacctgcag
cggccaagcctctacgacgcctggcacgacatcgtgccggtcgcgcccgatcctcggccg
ctggccacctacgacgtggtcggcccggtctgcgagaccggcgacaccttcgcacgcgca
cgcgttctgccggcgtgccaaccgggcgacctgctcgccatccagggcaccggcgcgtac
ggcgcgtcgatggcttccacctacaactcgcgcccgctcgccgccgaggtactgctggac
gatggccgctacgcggtcatccggcgccggcagaccctcgaggagatggtcgccggcgag
cagtcggcgcaggattgggccacgccatga
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