Frateuria edaphi: LQ772_01865
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Entry
LQ772_01865 CDS
T08888
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fed03009
]
LQ772_01865 (rimK)
Ribosome biogenesis [BR:
fed03009
]
Prokaryotic type
ribosomal protein modification factors
LQ772_01865 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_YheCD
D123
Motif
Other DBs
NCBI-ProteinID:
UGB46073
LinkDB
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Position
414617..415495
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AA seq
292 aa
AA seq
DB search
MKIAILSRNTRLYSTRRLVEAARERNHVVRVLDPLRCYVRIAPNNVSIRYKGKALRDIDA
VIPRIGTTTTFYGTAVLRQLEMMGVYTPNSSDAVLRARDKLRALQILASHGLDMPVTVFG
DNPDDTNDVLAMLGEPPHVIKLNEGSQGTGVVLAEKRSASQSVIEAFRGLYANFLVQEFI
AEAKGSDLRCFVVGKKVIAAMQREASPGDFRANLHRGGSAVKATLSAEEKRIAIRAAGAL
GLGIAGVDLLRSDRGPLLLEVNASPGLEGIETATGVDVSGHIIRHLEEQAGG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcgatcctctcgcgcaatacgcggctgtattcgacccgccggctggtcgag
gccgcgcgcgaacgcaaccacgtggtgcgcgtactcgacccgctgcgctgctacgtgcgc
atcgcgccgaacaacgtgtccatccgctacaagggcaaggcgttgcgggacatcgatgcg
gtgatcccgcgcatcggcaccaccaccaccttctacggcacggcggtactgcgccagctg
gagatgatgggcgtgtacacgcccaattcctccgacgcggtgctgcgcgcgcgcgacaag
ctgcgcgccctgcagatcctcgcctcgcacgggctggacatgccggtgaccgtgttcggc
gacaaccccgacgacaccaacgacgtgctggcgatgctcggcgagccgccgcacgtcatc
aagctcaacgagggcagccagggcaccggcgtggtgctggccgagaagcgcagcgcctcg
cagagcgtgatcgaggccttccgcggcctgtacgccaacttcctggtgcaggagttcatc
gcagaggccaagggcagcgacctgcgctgcttcgtggtcggcaagaaggtgatcgccgcg
atgcagcgcgaggcaagccctggcgacttccgcgccaacctgcatcggggcggcagtgcg
gtgaaggccaccctgagcgcggaggaaaagcgcatcgccatccgcgccgccggcgcgctg
ggcctgggaatcgccggcgtggacctgctgcgttcggatcgcggcccgctgctgctggag
gtcaatgcctcgcccgggctggaagggatcgagacggccaccggggtggatgtctccggc
cacatcatccgccacctggaagagcaggcgggcggctga
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