Frateuria edaphi: LQ772_02000
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Entry
LQ772_02000 CDS
T08888
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_02000
Transporters [BR:
fed02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ772_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UGB46100
LinkDB
All DBs
Position
complement(455124..457244)
Genome browser
AA seq
706 aa
AA seq
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MSSSVRPLALALTLALAAPLHAADAQQATNLERVEVSQSTLRLPRSQGALPMTITVIDRQ
DLANQLAITPDLGDAIGALVPSFAPSTQKLSVRGQTLRGRNPLYMIDGVPQSSPLRNGSR
DGYTIDPAMIERIEIVEGSNSLQGLGAAGGIINIITKHAPAKDGIRQEVTLDASAPTQGA
DGLGYGAAWLVGARSGAFDLVAGASWRKRGMYSDAHGRLIGVDGTQGDLMDSKSRDGFAK
LGYTFAGERRLQLTANRFDLQGNGDYTAVPGDMDAGIPTTSVREKQPGEAPRNRVLTTSL
DYRDPHLADGELRAQLYHQRNRELFGGGTFGTFQDPAYGAVVFDQSQNESVKDGARLSWS
RRGLLEDRLTVLAGADGYRDRTHQSLVQTNRNWVPPSTYTGWAPFLQAEYWPLQVVSINA
GLRQEHGRLEVPTFRTLASYGGVTVDGGSRSFKKTLPNIGAVWYLTDTLNLFASYAEGYT
LPDVGRVLRAISTPGQRVNDFLDLKPVVSDNREAGAEYAGAAFNARISYWTSASKLGALL
VFDAPNQVYNVARQRTEISGWEARAGWTPREGTRLDASYAINHGRSDRDGDGRVDSDLDG
ANIAPNRLNLSWTQRWNGALSSYLQLSRLASRDFATLGERTAHFDGYVTADAYLKWHAGT
AGEWTLGVQNLANKQYINYVSQTVGDDDSYFAGRGRTMSLAWQQVF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtccgtacgcccgctcgcgctcgccctgaccctggccctggcggccccgctg
cacgccgcggacgcgcagcaggcgaccaacctggagcgggtcgaggtttcccagagcacc
ctgcgcctgccgcgcagccagggcgcgctgccgatgacgatcaccgtgatcgaccgacag
gacctcgccaaccagctggccatcacgccggacctgggcgacgccatcggcgcgctggtg
ccctccttcgcgccatcgacgcagaagctctcggtgcgcggccagactctgcgcgggcgc
aacccgctctacatgatcgacggcgtgccgcagtccagcccgctgcgcaacggctcgcgc
gatggctacaccatcgacccggcgatgatcgagcggatcgagatcgtggaaggctccaac
tcgctgcaggggctcggagccgcgggcggcatcatcaacatcatcaccaagcacgccccg
gcgaaggacggcatccgccaggaagtcacgctggatgcgagtgcgccgacccaaggcgcc
gatggcctgggttacggcgcggcctggctggtcggcgcgcgatcgggtgcgttcgacctg
gtcgctggcgcctcctggcgcaagcgcggcatgtattcggacgcgcacggccggctgatc
ggtgtcgacggcacccagggcgacctgatggattcgaaaagccgggacggcttcgccaag
ctcgggtacaccttcgccggcgagcgccgcctgcagctgaccgccaaccgcttcgacctg
cagggcaacggcgactacaccgccgtccccggcgacatggacgcgggcattcccaccact
tccgtccgtgaaaagcagccgggcgaggcgccgcgcaatcgcgtgctgaccacgagcctg
gactaccgcgacccgcacctggccgacggcgaattgcgcgcgcagctctaccaccagcgc
aaccgcgagctgttcggcggcggcaccttcggtaccttccaggacccggcctacggcgcg
gtggtgttcgaccagtcgcagaacgaatcggtcaaggacggcgcgcggctgtcgtggtcg
cgccgcggcctgctcgaggacaggctgaccgtgctggccggcgccgacggctaccgcgac
cgcacccaccagtcgctggtgcagacgaaccgcaactgggtcccgccgagcacctacacc
ggctgggcgcccttcctgcaggccgagtactggccgctgcaggtggtgtcgatcaatgcc
ggcctgcgccaggaacacggccggctggaagtgccgaccttccgcacgctggcgtcctat
ggcggcgtgaccgtcgacggcggctcgcgcagcttcaagaagacgctgccgaacatcggc
gcggtctggtacctgaccgacacgctcaatttgttcgccagctatgccgagggctacacc
ctgcccgacgtcggccgcgtactgcgcgcgatcagcacgccgggccagcgcgtaaacgac
ttcctcgacctcaagcccgtggtgtcggacaaccgcgaggccggcgccgagtacgcgggc
gcggcgttcaacgcgcgcatcagctactggacgtccgcatcgaagctcggcgccctgctc
gttttcgatgcgcccaaccaggtctacaacgtggcacgccagcgcaccgagatcagcggc
tgggaagcgcgcgccggctggacgccgcgcgagggaacgcggctggacgcctcctacgcg
atcaaccacggccgctccgaccgcgacggcgacggccgggtggattcggacctcgatggc
gccaacatcgcgccgaaccgcctgaacctttcatggacccagcgctggaacggtgcgctg
tcgagctatctgcagctctcgcgtctggccagccgcgacttcgccacgctgggcgagcgc
accgcgcacttcgacggctacgtcaccgccgacgcttacctgaagtggcacgccggcacc
gcgggcgagtggacgctgggcgtgcagaacctcgccaacaagcagtacatcaactacgtc
tcgcagacggtcggcgacgacgactcgtacttcgccggccgcggacgcaccatgtccctc
gcctggcagcaggtgttctga
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