Frateuria edaphi: LQ772_02925
Help
Entry
LQ772_02925 CDS
T08888
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
fed
Frateuria edaphi
Pathway
fed00550
Peptidoglycan biosynthesis
fed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LQ772_02925 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fed01003
]
LQ772_02925 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
LQ772_02925 (mrcB)
Enzymes [BR:
fed01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LQ772_02925 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LQ772_02925 (mrcB)
Glycosyltransferases [BR:
fed01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LQ772_02925 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
fed01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LQ772_02925 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
SopA
Motif
Other DBs
NCBI-ProteinID:
UGB46269
LinkDB
All DBs
Position
663955..666276
Genome browser
AA seq
773 aa
AA seq
DB search
MALISRMGAFARHSWRWLRIPFWVVLGLGLGFVLPYTLILNKRVQDRFNDLVFAVPTRVY
ARPLELAAGVPMSPSALELELTFAGYIHDAAGSVPGTWTRNGSRYVISSRGYAGPDGGEL
PKRIRVTLGRGQVESLAEAASGAPIKLAHLDPARIATVYGSQQEERRIVRLADVPPLLVS
GLQAVEDRDFKHHIGLDFSAILRAAFANLRAGHTVQGGSTLTQQLVRNLFLDRSQNLVRK
FNEALLSLLIEAHYSKDRILEAYINEVFLGQQGNQAVHGFAAGAEFYFGRRLEDLRPQEI
ALLVGMVKGPSYYDPRRFPKRALARRNLVLKEFYDTGLLGAGQVNAAQAAPLDIATNAQL
PHNRFPAFMQLVRAQITNDFDDETLRNGKLSIFTTLDPAAQLYAEQAITTAIKNMGKRGD
KVQAAGVVTDTDSGSVLAVVGSKTPGDPGFNRALDARRPIGSLVKPFVYLVALTDPAHWN
LGTPLDDSPIMLRQPNGKTWMPQNDDNQSHGFVPMVDALAHSWNLATIHLGLAVGVQRVR
AFLESFGFTDINPSPSMLIGAVDMSPFQVAQLYEYVAADGHALPLLAVRGVVDGEGHTVK
RYEIEGGKGEYQQAVRLVTWAMQQVAEYGTAHSLGDSSLAWLNAAGKTGTSNDMRDSWFA
GFTADRLAVFWMGRDDNKPTGLFGATGGLRAWQDLFRHLPTRPLSPQPGEGLEMAWINPV
DGKPTQPECEGARQFPVVAGSLPADSEGCFWQRIGNFFGGDGNTPAPAASTLP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggcactgatctctcgcatgggcgcgttcgcgcgccacagctggcgctggctgcgcatc
cctttctgggtcgtgctcggcctggggctgggtttcgtgctgccgtacacgctgatcctc
aacaagcgcgtgcaggaccgtttcaacgacctggtgttcgccgtgcccacgcgcgtatat
gcgcgtccgctggaactggccgccggcgtaccgatgtcgccgtctgcgctggaactcgaa
ctgaccttcgccggctacatccacgatgccgccggcagcgtgccgggcacctggacgcgc
aatggcagccgctacgtgatctcctcgcgtggctacgccggtccggacggcggtgaactg
cccaagcgcatccgcgtgacactgggtcgcggccaggtcgagtcgctcgccgaggcggcc
agcggcgcgccgatcaagctcgcccacctggatccggcacgcatcgccaccgtctacggc
tcgcagcaggaagagcgccgcatcgtgcggctggccgacgtgccgccgctgctggtgagc
ggcctgcaggcggtcgaggaccgcgacttcaagcatcacatcggcctcgatttcagcgcg
atcctgcgcgccgccttcgccaacctgcgcgccggccacacggtgcagggcggctccacg
ctgacccagcagctggtgcgcaacctgttcctggaccgcagccagaacctggtgcgcaag
ttcaacgaggcgctgctctcgctgctgatcgaggcgcattactccaaggaccgcatcctg
gaggcctacatcaacgaggtcttcctgggccagcagggcaaccaggcggtgcacggcttc
gccgcgggcgccgagttctacttcggccgccggctggaggacctgcggccgcaggaaatc
gcgctgctggtgggcatggtcaagggcccgagctactacgacccgcgccgcttccccaag
cgcgcgctggcgcggcgcaacctggtgctgaaggagttctacgacaccggcctgcttggc
gccggccaggtcaacgccgcgcaggccgcgccgctggacatcgcgacgaacgcgcagctg
ccgcacaaccgcttcccggcgttcatgcagctggtgcgcgcgcagatcaccaacgacttc
gacgacgagacattgcgcaacggcaagctgtcgatcttcaccacgctcgaccccgccgcg
cagctctacgccgagcaggcgatcaccaccgccatcaagaacatgggcaagcgcggcgac
aaggtgcaggcggccggtgtggtcaccgataccgacagcggcagcgtgctggcggtggtc
ggcagcaagacgcccggcgaccccggcttcaaccgtgcgctcgatgcgcgccggccgatc
ggctcgctggtcaagcccttcgtctacctggtggcgctgaccgatccggcgcactggaac
ctgggcacgccgctggacgattcgccgatcatgctgcgccagcccaatggcaagacctgg
atgccacagaacgacgacaaccagtcgcacggcttcgtgccgatggtcgacgcgctggcg
cattcgtggaacctggcgacgatccacctgggccttgccgtcggcgtgcagcgggtcagg
gcgttcctggagtcgttcggcttcaccgacatcaatccgagtccctcgatgctgatcggc
gctgtcgacatgtcgccgttccaggtcgcccagctctacgaatacgtggccgccgacggc
cacgcgctgccgctgctggcggtgcgcggcgtagtcgatggcgagggccataccgtcaag
cgttatgagatcgaaggcggcaagggcgagtaccagcaagcggtgcggctggtcacctgg
gcgatgcagcaggtagccgagtacggcaccgcgcacagcctgggcgactcctcgctggcc
tggctcaacgccgccggcaagaccggcaccagcaacgacatgcgcgacagctggttcgcc
ggcttcaccgccgaccgcctcgcggtgttctggatgggccgcgacgacaacaagccgacc
ggcctgttcggcgccaccggcggtctgcgcgcctggcaggacctgttccgccacctgccc
acgcgcccgctttcgccgcagccgggcgagggcctggaaatggcctggatcaatccggtc
gacggcaagcccacgcagcccgagtgcgagggcgcgcgccagttcccggtcgtcgccggc
tcgcttccggccgatagcgagggctgcttctggcagcgcatcggcaacttcttcggcggc
gacggcaacacgcccgcgcccgccgcttccacgcttccctag
DBGET
integrated database retrieval system
