Frateuria edaphi: LQ772_03170
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Entry
LQ772_03170 CDS
T08888
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fed
Frateuria edaphi
Pathway
fed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ772_03170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_03170
Enzymes [BR:
fed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LQ772_03170
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQ772_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UGB46315
LinkDB
All DBs
Position
712618..713280
Genome browser
AA seq
220 aa
AA seq
DB search
MATRSVSNPFGVPLAKPVDEVPAGALATLRREARDCHACPLWRYGTQTVFGQGPASARVM
LIGEQPGLHEDREGVPFVGPAGQLLDRALGEAGLDRSTLYLTNTVKHFKYEMRGTAKLHK
RANAAEQAACRMWLAAELLRVKPKLVVGLGAMAAQTMFGNAFRITRERGVWRPLGEGAQG
LATWHPSAVLRMPEEAKRHQAFDELVADLRMVAGALGRLT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgttcggtcagcaaccccttcggcgtcccgctggccaagcccgtggacgag
gtaccggcgggcgccctcgccacgttgcggcgcgaggcgcgcgactgccacgcctgtccg
ctgtggcgctacggtacgcagacggtgttcgggcagggtccggcgtcggcccgggtgatg
ttgatcggcgaacagcccgggctgcacgaggaccgcgaaggcgtgccgttcgtcggtccc
gccgggcaactgctcgatcgcgcgctgggcgaagcgggactggaccgctccaccttgtac
ctgaccaacaccgtcaagcatttcaagtacgagatgcgcggcaccgccaagctgcacaag
cgcgccaatgcggccgagcaggcggcttgccgcatgtggctggccgccgagctgctgcgg
gtgaagccgaagctggtggtgggcctgggcgccatggcggcacagacgatgttcggcaat
gccttccgcatcacccgcgagcgcggcgtgtggcgaccgctgggcgaaggcgcgcaggga
ctggcgacctggcatccctccgccgtgctgcgcatgccggaggaagcgaagcggcaccag
gcattcgacgaactggtggcggatctgcggatggtggccggagcgctgggaagactgacg
tag
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integrated database retrieval system
