Frateuria edaphi: LQ772_03805
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Entry
LQ772_03805 CDS
T08888
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fed03009
]
LQ772_03805
Enzymes [BR:
fed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LQ772_03805
Ribosome biogenesis [BR:
fed03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LQ772_03805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Acb2_Tad1_hairpin
DUF2015
Motif
Other DBs
NCBI-ProteinID:
UGB46436
LinkDB
All DBs
Position
840317..841030
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AA seq
237 aa
AA seq
DB search
MKLVRLIANLGYGSRKEVMQLFREGRVTDPAGEVLYTDDRAEHADIRIDGEPLDPPAGLV
LLMHKPTGYTCSRKDAGRLVYDLLPPRWRRRDPALSTVGRLDRDTSGLLLLTDDGALLHR
IISPKASVAKVYEATLARDLRGDEGEVFASGTLMLESETTPLAPAQLQPLGPRRARLTVT
EGRYHQVRRMFAAVGNHVDALERVAIGRLTLDGLAPGAWRALAAEEIAEAFEPPSLP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgcgcctcattgccaacctcggctacggcagccgcaaggaagtgatgcag
ctgttccgggaagggcgcgttaccgatccggcgggcgaggtgctctacaccgacgaccgg
gccgaacacgcggacatccgcatcgacggcgaaccgctggaccctccggccgggctggta
ctgctgatgcacaagccgaccggctacacctgctcgcgcaaggacgccggccggctggtc
tacgacctgctgccgccgcgctggcggcgccgcgatccggcgctgtctaccgtcgggcgg
ctcgaccgcgacacgtccgggctgttgctgctcaccgacgatggcgcgctgctgcaccgg
atcatttcgcccaaggccagcgtcgccaaggtttacgaggccacgcttgcccgcgacctg
cgtggcgacgagggggaggtgttcgccagcggcacgctgatgctggaatcggaaaccacg
ccgctcgccccggcacagctgcagccgctcgggccgcgccgcgccaggctgacagtcacc
gaggggcgctatcaccaggtgcggcgcatgttcgccgccgtgggcaaccacgtggacgcg
ctcgagcgtgtggcgatcggccggctgacgctcgacggcctggcgccgggtgcgtggcgc
gcgctggcggcggaggagatcgccgaggctttcgagccgccgtcgcttccgtag
DBGET
integrated database retrieval system
