Frateuria edaphi: LQ772_04080
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Entry
LQ772_04080 CDS
T08888
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
fed
Frateuria edaphi
Pathway
fed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ772_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_04080
Enzymes [BR:
fed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
LQ772_04080
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQ772_04080
BRITE hierarchy
Motif
Pfam:
UDG
DUF5947
Motif
Other DBs
NCBI-ProteinID:
UGB46485
LinkDB
All DBs
Position
complement(884041..884550)
Genome browser
AA seq
169 aa
AA seq
DB search
MKLPAEQHVLPDLLRPGLALVFCGTAAGERSAREGAYYAHPGNLFWRALFEAGITPRRLR
PTEYPQLLDLGIGLTDLAKRHSGNDADLPRDAFDVPALLAKIERFQPRLLAFTSKTAARA
ALGRPIGDCGLQPERIGQTRVVALPSPSGQARRHWDLEPWRALARLAAG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaccggctgagcagcacgtactgcccgacctgctgcgtccgggccttgcgctg
gtgttctgcggcaccgcggccggcgagcgctcggcgcgcgagggcgcgtactacgcgcac
ccgggcaatctgttctggcgcgcgctgttcgaggccggcatcacgccgcgtcgcctccga
ccgaccgagtacccgcaattgctggacctgggcatcggcctcaccgaccttgccaagcgt
cacagcggcaacgatgccgatctgccgcgcgatgcgttcgacgtccccgcgctgctcgcc
aagatcgaacgcttccaaccgcggctgctcgcctttaccagcaagaccgccgcgcgcgcg
gcgcttggccggccgatcggggattgtggattgcaacccgagcggatcggacaaacccgc
gtggttgccctgccctcgccttcgggccaggcgcgcaggcactgggacctcgagccctgg
cgcgcactggcaagactggccgccggatag
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