Frateuria edaphi: LQ772_04435
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Entry
LQ772_04435 CDS
T08888
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fed02044
]
LQ772_04435
02035 Bacterial motility proteins [BR:
fed02035
]
LQ772_04435
Secretion system [BR:
fed02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LQ772_04435
Bacterial motility proteins [BR:
fed02035
]
Pilus system
Pilus assembly proteins
LQ772_04435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Smoothelin
DUF4064
UPF0370
Motif
Other DBs
NCBI-ProteinID:
UGB47420
LinkDB
All DBs
Position
complement(959077..960276)
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AA seq
399 aa
AA seq
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MTMYDWVALDKRGKRMKGEMPAKNASLVKAELRRQGMNPQTVREKSKPMFGSTGSTVKPR
DVAIFSRQIATMMASGVPMVQSFEIIADGQKNVRFKNIITDVKQGIEGGASLHEALGKYP
VQFDELYRNLVRAGESAGVLDTVLDTVATYKERMEGIKAKIKKALFYPVMVLAVALLVSM
IMLLFVVPVFAQTFKDAGAELPAPTQIVIGASEFMKAYWWVVIASIVGGVVAIVMGKRRS
VKFAHFLDRLMLKLPVIGNILRQSAIARFARTLGVTFRAGVPLVEALDAVAGATGSVVYS
EAVHRMRDDIAVGHQLQLSMRQTGLFPNMVVQMTAIGEESGALDNMLFKVAEFYEEEVNN
AVDTLSTLLEPLIMVILGVLVGGMVVSLYLPIFKLAGTV
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtacgactgggtcgcgctggacaagcgtggcaagcgcatgaagggcgagatg
ccggcgaagaacgcgtcgctggtcaaggccgagctgcgccgccagggcatgaacccgcag
acggtgcgcgagaagtccaagccgatgttcggatccaccggaagcacggtgaagccgcgc
gacgtggccatcttcagccggcagatcgccacgatgatggcctcgggcgtgcccatggtg
cagtcgttcgagatcatcgccgacggccagaagaacgtccggttcaagaacatcatcacg
gacgtcaagcagggcatcgagggtggcgcgtccctgcacgaagcgctgggcaagtaccca
gtgcagttcgacgagctctaccgcaacctggtccgcgccggcgaatcggccggcgtgctg
gacacggtgctggacaccgtggccacctacaaggagcggatggaaggcatcaaagccaag
atcaagaaggcgctgttctaccccgtgatggtattggcggtggcgttgctggtcagcatg
atcatgctgctgttcgtggtgccggtgttcgcgcaaaccttcaaggacgccggtgcggaa
ctgcctgctcccacgcagatcgtcatcggcgcctcggaattcatgaaggcctattggtgg
gtcgtgatcgcttcgatcgtgggcggcgtggtagcaattgtcatgggcaagcggcgctcg
gttaagtttgcccacttcctcgatcgcctcatgctcaagctcccagtgatcggcaacatc
ctgcgccaatccgcgatcgcgcgtttcgctcgcacgctgggcgttaccttccgcgccggc
gtgccgctggtggaggcgctggatgccgtggccggcgcgaccggcagcgtggtgtattcc
gaggcggtccaccgaatgcgcgacgacatcgcggtcggccaccagctccagctctcgatg
cgacagaccggcctgttccccaacatggtggtgcagatgactgccatcggcgaggaatcc
ggcgctctggacaacatgttgttcaaggtcgccgagttctatgaggaagaggtcaacaat
gccgtcgacactttgtcgactctgctcgaaccgctgattatggtgattctgggcgtgctg
gtcggcggcatggtggtgtcgctgtacctgccgatcttcaagctggccggcaccgtttaa
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