Frateuria edaphi: LQ772_05015
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Entry
LQ772_05015 CDS
T08888
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fed03021
]
LQ772_05015 (rapA)
Transcription machinery [BR:
fed03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LQ772_05015 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UGB46660
LinkDB
All DBs
Position
complement(1087073..1089913)
Genome browser
AA seq
946 aa
AA seq
DB search
MFVPGQRWISTAEPELGLGTVLRVEGRGVQVLFAKAGVLRPYAADSAPLVRAEFRPGQRV
AGKGLAFLVERVEIKEDLLIYRGEGRELHEGQLDDEQSVSQADDRLVGGRTDTVAQFDLR
LEGLRRRAQARRSPTWGLEASRIGLVPHQLRVAGIAASRRPPRVLLADEVGLGKTIEAGM
ILARQLATGRASRVLVLLPDTLVYQWFVELLRRFNLSFAIYDEERCEALEQSGDGRNPFE
DEQLVIADFRFLEENPKRARELVEAEWDLLIVDEAHHLAWTPDAASPRYTLVEQLAAKTP
GVILLTATPEQLGRSGHFARLRLLDPQRYHDLDVYLAEAERFQALSPIADRLQSGEPLDD
AQRDALREIFAGDAGLLAQLDGTGTPASARDLLDALIDRHGTGRAMFRNRRAGIGGFPRR
VPEWQLIDADALDENARQVLLAEFHADIQQPAPALELEYANDPRLEALVTLLDAHPQDKF
LLICRSQAKVLALEEALRTRTGAGIARFHEGLGIVQRDRNAAYFAQPDGARLLLCSEIGS
EGRNFQFAHRLILWDLPLDPDLLEQRIGRLDRIGQVHDIAIHILAVQDSAQHVLARWYDE
GIDAFRSSPADGRELLRRYGEPLVQLAAEHARNADSRDQELDALIADTRATHEELAALIR
AGRDHLLELAASRDPHADELGQAFRREDVDPSRDAYVQRLLEAFGIHAEELGGNVLLLDP
QYLSTDALPGFAEGPVSATFARDVALAREELPLLRFDHPLVQGALDLALSGEQGNAAFMV
DDALPPRSALLQAVFLLECVADRALDAERFLPALPLVVTIDTRLAERAGFEPSEAAVRKA
ADRNIEVPRYRKFLAKLVPPMLEKAEAIAGQRAQEHIAEAVAQATAELDAELARLRALRE
VNPSINPAEIATLAAERQALLGALPQSRLRLDAVRFVASPDFLALR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtacctggtcaacgctggatctccaccgccgaacccgaactgggcctgggcacc
gtcctgcgggtggagggccgcggcgtgcaggtgctcttcgccaaggccggcgtgctgcgc
ccctacgcggccgactccgcgccgctggtacgcgccgaattccgccccggccagcgcgtg
gctggcaagggcctggccttcctggtcgagcgggtggagatcaaggaagacctcctgatc
taccgcggcgagggccgcgagctgcacgaaggccagctcgatgacgagcagagcgtgagc
caggccgacgatcgcctggtcggcggacgcacggataccgtggcgcaattcgacctgcgc
ctcgagggcctgcgccgccgcgcccaggcgcgccgctcgccgacctggggcctggaagca
tcacgcatcggcctggtgcctcaccagctgcgcgttgccggcatcgccgcttcgcgccgc
ccgcctcgcgtcctgctggccgatgaagtgggtctgggaaaaaccatcgaggcgggcatg
atcctcgcccgccagctcgccaccggccgcgcctcgcgcgtgctggtgttgctgccggac
acgctcgtgtaccagtggttcgtcgagctgttgcgccgcttcaacctgagcttcgcgatc
tatgacgaggaacgctgcgaggcgctggagcagtccggcgacgggcgcaatccgttcgag
gacgagcaactggtcatcgccgacttccgcttcctggaggaaaaccccaagcgcgcgaga
gagctggtggaagcggagtgggacctgctgatcgtcgacgaagcgcaccacctggcctgg
acgcccgatgcggccagcccgcgctacacgctggtcgaacagctggcggcaaagacgcct
ggcgtgatcctgcttaccgccacgcccgagcagctcggccgcagtggccacttcgcccgc
ctgcgtctgctcgatccgcagcgctaccacgatctggacgtctatctggccgaagccgag
cgcttccaggcgctctcgccgattgcagaccgactgcaatccggcgagccgctcgacgac
gcccagcgcgacgcactgcgcgagatcttcgccggcgacgcgggcctgctcgcgcagctg
gatggcaccggcacgccggcttccgcgcgcgacctgctcgacgcattgatcgaccgccat
ggcaccggccgcgcgatgttccgcaatcgccgcgccggcatcggcggcttcccgcgccgc
gtgcccgagtggcaactgatcgatgccgacgcgctggacgagaacgcccgccaggtgctg
ctggccgaattccacgccgacatccagcagccggcgccggcgctcgaactggaatacgcg
aacgacccccgcctggaggcgctggtaaccctcctcgacgcacacccgcaggacaagttc
ctgctgatctgccgcagccaggccaaggtcctggcgctggaggaagcgctgcgtacccgc
accggcgcgggcatcgcgcgcttccatgaaggcctgggcatcgtgcagcgcgaccgcaac
gccgcctacttcgcgcagcccgatggcgcgcgcctgctgctctgttcggagatcggttcg
gaaggacgcaacttccagttcgcgcaccggttgatcctgtgggacctgccgctggatccg
gacctgctcgaacagcgcatcggccgcctggaccgcatcggccaggtccacgacatcgcc
atccacatcctcgccgtccaggacagtgcgcaacacgtactcgcgcgctggtacgacgag
ggcatcgatgcgttccgttccagccccgccgacgggcgcgagctgctgcgccgctacggc
gagccgctggtgcaactggccgccgaacatgcgcgcaacgccgacagccgcgaccaggaa
ctggatgcgctgatcgccgacacccgcgccacgcacgaggaactggccgcgctgatccgc
gccggccgcgaccatctgctggaactggccgcgagccgcgacccgcatgccgacgaactg
ggccaggccttccgccgcgaggatgtcgacccctcgcgcgacgcctacgtgcaacgcctg
ctggaggccttcggcatccacgccgaggaattgggcggcaacgtgctgctgctcgacccg
caatacctttccactgacgcgctgcccggctttgccgaaggtccggtgtcggcgaccttc
gcccgcgacgtggcgctggcgcgcgaggagcttccgctgctgcgcttcgaccatccgctg
gtgcagggcgcgctggacctcgcgctttcgggcgaacagggcaacgccgcgttcatggtc
gacgacgcgctgccaccgcgcagcgcgctgctccaggccgtgttcctgctcgaatgcgtg
gccgaccgggcgctggacgccgagcgcttcctgcccgcgttgccgctggtggtcacgatc
gacacgcgactggccgagcgcgccggtttcgaacccagcgaagcggccgtgcgcaaggcg
gccgaccgcaacatcgaggtgccgcgctaccgcaagttcctcgccaagctcgtgccgccg
atgctcgagaaagccgaggccatcgccggccagcgggcgcaggagcacatcgccgaagcc
gtcgcccaggcaaccgccgaactggatgccgagctggcccgcctgcgcgcactgcgggag
gtcaacccgtcgatcaatccggcggaaatcgccacccttgccgccgaacgccaggccctg
ctcggcgcgctgccacaatcgcgcctgcgcctggacgccgtccgcttcgtcgccagcccg
gacttcctcgccctgcgctga
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