KEGG   Frateuria edaphi: LQ772_05400
Entry
LQ772_05400       CDS       T08888                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
fed  Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:fed00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fed02044]
    LQ772_05400 (tssC)
Secretion system [BR:fed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LQ772_05400 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 BMFP TssC DUF4456 DUF6376
Other DBs
NCBI-ProteinID: UGB46733
LinkDB
Position
1165577..1167070
AA seq 497 aa
MSTETLAERGQATETLEAGDFAALLSKEFKPKSERAKEEVESAVRTLAEQVLSKSDVVSD
DVAQTINAYIAEIDRKLSEQINQIMHHADFQKLESAWRGLHYLVNNTETDQLLKIRVMNI
SKKELGKTLKRYKGTAWDQSPIFKKMYEEEYGQLGGEPYGCLVGDYYFDHSPQDVELLGG
IAQVAAAAHAPFLAAANSSLMGMESWNELSNPRDLAKIFSTPDYASWRSLRESDDAKYLG
LAMPRTLSRLPYGAATNPVEEFDFEEDTAGADSSKYTWQNAAYAMAVNINRSFKAYGWCS
RIRGIESGGAVEGLPVHAFPTDDGGVDMKCPTEIAITDRRSAELDKMGLMPLVHRKNSDM
AAFISAQSLAKPEEYDDPDATANAALSCRLPYMFACCRFAHYLKCIVRDKIGSFSDREQM
QNWLTNWVMQYVDGDPANSSEETKARKPLSAAEVVVEEVEGAPGYYTSKFFLKPHYQLEG
LTVSLRLVSRLPSAAKA
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgtccaccgagaccctggccgaacgcggccaagccaccgaaaccctcgaagccggcgac
ttcgccgcgctgctgagcaaggaattcaagcccaagagcgagcgcgcgaaggaagaggtc
gagtcggccgtgcgcacgctcgccgagcaggtgctgagcaagtccgatgtggtgtccgac
gacgtcgcccagacgatcaacgcctacatcgccgagatcgaccgcaagctcagcgagcag
atcaaccagatcatgcaccacgccgatttccagaagctggaaagcgcctggcgcggcctg
cactacctggtcaacaacaccgagaccgaccagctcctgaagatccgcgtcatgaacatc
tccaagaaggagctgggcaagacgctcaagcgctacaagggcaccgcctgggaccagagc
ccgatcttcaagaagatgtacgaagaggaatatggccagctgggcggcgagccgtacggc
tgccttgtcggcgactactacttcgaccacagcccgcaggacgtcgagctgctgggcggc
atcgcccaggtggcggccgcagcgcacgcgccgttcctggccgcggccaactccagcctg
atgggcatggagagctggaacgagctgtccaacccgcgcgacctggccaagatcttctcc
acgcccgactacgcctcctggcgttcgctgcgtgagtcggacgacgccaagtacctgggc
ctggcgatgccgcgcacgctctcgcgcctgccctacggcgccgccaccaacccggtggag
gagttcgacttcgaggaagacaccgccggtgccgattcctccaagtacacgtggcagaac
gccgcctacgcgatggcggtgaacatcaaccgctcgttcaaggcctacggctggtgctcg
cgcatccgcggcatcgagtccggcggcgcggtcgaaggcctgccggtgcacgccttcccg
accgacgacggcggcgtggacatgaagtgcccgaccgagatcgccatcaccgaccgccgt
tcggcggagctggacaagatgggcctgatgccgctggtgcatcgcaagaactcggacatg
gccgccttcatcagcgcccagtcgctggccaagccggaggagtacgacgatccggacgcc
accgccaacgccgcgctgagctgccgcctgccgtacatgttcgcctgctgccgcttcgcg
cattacctgaagtgcatcgtgcgcgacaagatcggctccttcagcgaccgcgagcagatg
cagaactggctgaccaactgggtcatgcagtacgtcgacggcgacccggccaactctagc
gaggagaccaaggcgcgcaagccgctgtcggccgccgaagtggtggtggaagaagtcgag
ggcgcaccgggctactacacctccaagttcttcctcaagccgcattaccagctcgagggt
ctcaccgtgtcgctgcggctggtctcgcgcctgccgtcggctgccaaggcctga

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