KEGG   Frateuria edaphi: LQ772_05420
Entry
LQ772_05420       CDS       T08888                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
fed  Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:fed00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fed02044]
    LQ772_05420 (tssF)
Secretion system [BR:fed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LQ772_05420 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UGB46737
LinkDB
Position
1169095..1170978
AA seq 627 aa
MDPRLLRYYNRELQHVREMGGEFAREYPKIAGRLGLEGFECADPYVERLLEGFAFLAARV
QLKLDAQQPVFTQHLMEMVYPHYLAPVPSMAVVEMAADLKESALVGGHVVPRHTALRSLT
GRDDRTACEYRTAHDVTLWPLKLTEAKYFDTPAAIAAAGVSIPADRTVRAGLRLKFAVTA
GAQANLLAMDELPIFLAGADELPKRLYEQLLGNVAGVAVRAKGEGGISSTWLEPGSIKPK
GFDDAEAMIPYSGRSFSGYRLLQEYFACPERFLFAVFTGLRQALARAQGNEFEIVVLFDR
SVSRLHNAVDAGNFRLFCTPAVNLFPRRADRIHLQQGRTEYHVLADRTRPMDFEIHSIGN
VEGFGDSQEPEQRFQPFYGCDERTWQGGHGAFYTVRREPRQLSSRQKLQGARSSYVGSEL
FIALVDGSEAPYSSRLRQVGMQLMCTNRDLPLQMPVGKSHTDFTLDIGAPVESVRCVAGP
TKPRAAVAGGETAWRLLSHLQLNYVSLLGEGNADGAAALREMLTLYCDEFDSAARRQIDG
IKAVGSQSIVRRIPVPGPISFGRGLEITLTCDEGAFEGTGAFLLGSVMQHFFARYVSINS
FTETVLRTLERNEVARWPARLGSRQTL
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggatccgcgcctgctccgctactacaaccgcgaactgcagcacgtgcgcgagatgggc
ggggagttcgcgcgcgagtacccgaagatcgccggccgcctgggcctggaaggcttcgaa
tgcgccgacccctacgtcgagcgcctgcttgagggctttgccttcctcgccgcacgcgtg
cagctgaagctcgatgcgcagcagccggtgttcacccagcacctgatggagatggtgtac
ccgcattatctcgcccccgtgccgtcgatggcggtggtggagatggcggcggacctgaag
gaaagcgcgctggtcggcggccacgtggtgccgcgccacaccgccctgcgcagcctgact
ggccgtgatgaccgcactgcctgcgaataccgcacggcgcacgatgtcacgctctggccg
ctcaagctcaccgaggcaaagtatttcgatacgccagcggccatcgccgctgcgggcgtg
tccattcctgcggaccgcaccgtacgggccggcctgcgccttaagttcgcggtcaccgcc
ggcgcgcaggccaacctgctggcgatggacgaactgccgatcttcctggccggtgccgac
gagttgcccaagcgtctgtacgaacagttgctcggcaatgtcgcgggcgtggcggtgcgc
gccaagggcgagggtggcatctccagcacctggctcgaaccgggcagcatcaagcccaag
ggcttcgacgacgccgaggcgatgattccctacagcggccgctccttcagcggctaccgg
ctgctgcaggaatacttcgcctgtcccgagcgtttcctgttcgccgtgttcaccggcctg
cgccaggcgctggcccgggcgcagggcaacgagttcgagatcgtggtgctgttcgaccgc
agcgtcagccgcctgcacaacgcggtggacgcaggcaacttccggctgttctgcacgccg
gcggtaaacctgttcccgcgccgcgccgatcgcatccacctgcaacagggtcgcaccgaa
taccacgtgctggccgaccgcacgcgaccgatggatttcgagatccattcgatcggcaac
gtcgaaggcttcggcgatagccaggaacccgagcagcgcttccagcccttctatggctgc
gatgagcgtacctggcagggcgggcacggcgcgttctacacggtgcggcgcgagcctcgc
caactgtcgtcgcggcagaagctgcagggcgcgcgctccagctacgtcggcagcgaactg
ttcatcgcgctggtcgatggcagcgaggcgccgtattccagtcgcctgcgccaggtcggc
atgcagttgatgtgcaccaaccgcgacctgccgttgcagatgccggtaggcaaatcgcat
accgacttcacgctggacatcggcgcgccggtcgaatcggtgcgttgtgtcgccggaccg
accaagccgcgagccgcggtcgctggcggcgagaccgcctggcggctgctcagccacctg
cagctgaattacgtctcgctgctgggcgaaggcaacgccgatggcgccgctgcgctgcgc
gagatgctcacgctctactgcgacgagttcgactcggccgcacgccggcagatcgacggc
atcaaggcggtgggctcgcaatcgatcgtgcggcgcattcctgtgccgggccccatcagc
ttcggccgcggcctggaaatcacactgacctgcgacgagggcgccttcgaaggtacgggc
gccttcctgctcggttcggtcatgcaacatttcttcgcacgctacgtctcgatcaactcc
ttcaccgagacggtgctgcgcaccctggaacgcaacgaggtcgcccgatggccggcacgg
ctgggctcgcgccagacgctgtag

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