KEGG   Frateuria edaphi: LQ772_05500
Entry
LQ772_05500       CDS       T08888                                 
Symbol
vgrG
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
fed  Frateuria edaphi
Pathway
fed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LQ772_05500 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fed02044]
    LQ772_05500 (vgrG)
Secretion system [BR:fed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LQ772_05500 (vgrG)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C Sarcoglycan_1
Other DBs
NCBI-ProteinID: UGB46752
LinkDB
Position
1185317..1187341
AA seq 674 aa
MTYRMTMTSSLGDKLTAASLTGSEQLGRLYSYHLKMWSEDNGIDLLALLGSAITVTYEEG
TYTRHVNGIVAEASQSGFESFQGKEYAAYSVTLVPKAWLLLNKVDCRIYLNQSVPDIVKA
VLAEIGYSDIKLELTASYPAREYCVQYREDYFNFISRLMEQEGIYYFFRHADGVHTMVLA
DSLGAHSASDGFATLPYLPQAGDSGASHEIAVTEFSPARSVQTIKYSLTDYDPLKPKASL
LGVNSASNADGNHAMSDLESFDYPGEHDSADVGKHYAQVRVEAINAMQSQFSGATNAGGL
LTGALFKLEGFPQAKLNQEYLVAGSTLHIANPMQGGEGEQVHCSFTAIQSKQPFRAMPMA
VKPMVVGLQTAVVTGSDTAEDIAVDKYGRIQVTFHWNKPDKKNAQSSCPVRVASAWAGKN
WGAVSIPRIGQEVVVSFLEGDPDRPLVIGSVYNADNMPPYTLPDNKTQSGIKSRSLLGGT
ADFNELRFEDKKGEEDFFIHAQKDMHEEVENDHVVTIDHDETVTVKHDQTLTVENDQTET
IKHDRKVTVQNDDKLDVTNNGTTGIGQKFKLTAGTEIELVTGASSIVMKSSGDIEIKGVN
IKITGSVGVKVEGQVEVGVKAGATMDLGAGATLKMHSDAMLEVAGGAMATVKAPMLTLKG
DGMNQVSGGVVMIG
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgacctaccgtatgacgatgacgtcgtctctcggcgacaagctcacggcggcaagcctt
acgggcagcgaacagttggggcggctctattcctaccatctgaagatgtggagcgaggac
aacggcatcgacctgctcgcgctgctcggcagcgccatcacggtgacgtacgaggaaggg
acctacacgcgccatgtcaacggcatcgtcgccgaggcatcccaaagcggtttcgagagc
ttccagggcaaggaatacgccgcctattcggtgacgctcgttcccaaggcctggctgttg
ctgaacaaggtggactgccggatttacctgaaccagtccgtgcccgacatcgtcaaggcg
gtactggcggaaatcggctacagcgacatcaagctcgagctcaccgcgagctacccggcg
cgcgaatactgcgtgcagtaccgcgaggattatttcaacttcatcagccggttgatggag
caggaaggcatctactacttcttccggcacgccgacggcgtgcacaccatggtgctggcc
gactcgctgggagcgcactccgcatccgacggattcgccacgctgccgtatctgccgcag
gccggagacagcggcgcgtcgcacgagatcgcggtcaccgaattctcgccggcgcgctcg
gtgcagacgatcaagtattcgctgaccgactacgatccgctgaaaccgaaggcatcgttg
ctgggcgtcaattcggccagcaatgccgacggcaaccatgcgatgtccgacctggagtcg
ttcgactatcccggcgagcacgactctgccgacgtgggcaagcactacgcgcaggttcgc
gtcgaagcgatcaatgccatgcagtcgcagttctccggtgcgaccaatgccggcggcctg
cttaccggcgcgctcttcaagctggaagggtttccgcaggccaagctgaaccaggaatac
ctggtggccggctcgaccctgcacatcgccaatccgatgcagggtggggagggcgagcag
gtccattgcagtttcaccgccatccagagcaagcagccgttccgcgccatgccgatggcg
gtcaagccgatggtcgtcgggctgcagacggcggtcgtcacgggaagcgacacggccgaa
gacatcgccgtggacaagtacggccgcatccaggtcacgttccactggaacaagcccgac
aagaagaacgcacaaagttcgtgccccgtgcgggtggcgtcggcctgggccggcaagaac
tggggcgcggtgagcattccgcgcatcggccaggaagtggtggtcagcttcctggaaggg
gatcctgaccgcccgttggtgatcggcagcgtctacaacgccgacaacatgccgccctac
acgctgcccgacaacaagacccagagcggcatcaagagccgcagcctgcttggcggcacc
gccgacttcaacgagttgcgcttcgaggacaagaagggcgaagaggacttcttcatccac
gcccagaaggacatgcacgaggaagtcgagaacgaccacgtcgtgaccatcgaccacgac
gaaacggtgacggtcaagcacgaccagacgcttaccgtcgagaacgaccagacggagacg
atcaagcacgaccgcaaggtcaccgtgcagaacgacgacaagctcgacgtcaccaacaac
ggcaccaccggcatcggccagaagttcaagctgacggccggcaccgagatcgagctggtg
accggcgcgtccagcatcgtgatgaagagctcgggcgacatcgagatcaagggcgtcaac
atcaagatcaccggcagcgtgggggtgaaggtcgagggccaggtcgaagttggcgtcaag
gccggcgccacgatggacctgggcgccggggccacgctcaagatgcattcggacgccatg
ctcgaagtggctggcggcgcgatggccaccgtcaaggcacccatgctcacgctcaagggc
gatggcatgaaccaggtgtccggcggcgtggtgatgatcgggtaa

DBGET integrated database retrieval system