KEGG   Frateuria edaphi: LQ772_05525
Entry
LQ772_05525       CDS       T08888                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
fed  Frateuria edaphi
Pathway
fed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LQ772_05525 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fed02044]
    LQ772_05525 (tssM)
Secretion system [BR:fed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LQ772_05525 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_22 AAA_28 AAA_16 AAA_33 AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: UGB46755
LinkDB
Position
1192125..1195637
AA seq 1170 aa
MAKLLSLLKSAWFVTLIGVLLLSVLVWLGGPYLGIGDSQPLASPVARLLLIMVIVLAWGA
WLQVQALRARGKANKMSGELAGQGGPTPAGGGDNRGAGEGAQLQGRFQEAVEMLRKRRRG
NLYALPWYVVIGPPGSGKSTLLQNSGLNFPLSERFGKEALRGVGGTRNCDWWFTDEAVFL
DTAGRYTTQDSDRSADASAWGEFLKLLRRYRKRRPINGVIVAMSLSDLMVLDDAGRQEHA
GAIRRRLDELSEHLRIGVPVYLVLTKCDLVAGFGEFFDDMNPELRSQVWGVSFPLGKTME
GSAAKAFADEYRLLLDRLNTRTLDRLHAERDRGRRAAVLSFPQQLAALGETARQFVEGVF
AGHAYGTPPLLRGVYLTSGTQEGTPIDRMMGAVARTFGLDAARVNPQGAQRRTFFVERLL
KEVLFRESGLAGTNPAIERRKVAVQLASYAGMALLTVLLCFGFATSYARNRAYLGQVQDV
LKDYPAGVDLPASATPKEYFAKVLDRLEALSAVQQTATPEGGVPMSMRLGLYQGKAVGED
LHAAYLRELNALLLPGVGAQFRGGLAASASDPQALYYYLKGYLMLGEPKHLDADELVALA
NLEWRKVFPDEPVLQQALAKHFQALVEEPGQLRALPLDAALVEQARTTLRTADLSTLVYG
SMKLSAESAGKPLQLDKELGLLGNVFRRQSGKPLSDPLPALYTQPVFAIEADKGVEEAVK
QFASDDWVFGAEPIDALAQARLSRQVLALYEADYIKAWDALLADLQLQPAASIQDASTIA
AKLSGPSSPLKSLLKLVRDNTSDMLRAPAPDAGDKALDAAKDAAAKKATQNALGRALAKV
GGGAGSAEDAPPGSAISAHFDTLNKLSEGAPGAAPIDQTLAALDQLSKTLLTMTDFSDAA
GQPNPQLLMAQQAAAQLPPPVSGWVASLTGKSQALVASGTKGALDEQFQQAAAQDCAAFT
QGRYPFSPSSRNDIPVQNFGEMFGYGGRYDGFFKQTLAKLVDTSGRNWQWKSGPGAVSGS
ASMLAQMQLADSIKQMYFRNGSPTPEVGFTLLAPVLAPGIGHFAIAIDGQTFDYKPGGTT
SMAMKWPGPTPGQVKVSAWDTAGNLLSSYDYQGDWAFFHALQAAQLSRQSDLRYQAHFDF
GGQAVQLVVQASNLKNPFLNTQVQRFRCGG
NT seq 3513 nt   +upstreamnt  +downstreamnt
gtggcgaagttgctgagccttttgaagtccgcctggttcgtcacgctgatcggcgtgctg
ctgctctcggtgctggtgtggctgggcggtccgtacctcggaatcggcgattcgcagccg
ctggccagcccggtcgcgcggctgctgctgatcatggtgatcgtgcttgcctggggtgcc
tggctgcaggtgcaggcgctgcgcgcgcgcggcaaggccaacaagatgtccggcgagctg
gccgggcagggcggcccgacgcctgctggtggcggcgacaaccgcggcgcgggtgaaggc
gcgcagctgcagggccgtttccaggaagcggtggaaatgctgcgcaagcgccgtcgcggc
aacctgtatgcgctgccctggtatgtggtgatcggcccgccgggctcgggcaagagcacg
ttgctgcagaactccgggctcaatttcccgctgtccgaacgcttcggcaaggaagcgctg
cgtggcgtcggcggcacccgcaactgcgactggtggttcaccgacgaggcggtcttcctg
gacaccgccggccgctacaccacgcaggattcggaccgctcggccgacgccagcgcctgg
ggcgaattcctcaagctgctgcgtcgctaccgcaagcgccgaccgatcaacggcgtgatc
gtggcgatgagcctgtccgacctgatggtgctggatgacgccggacgacaggaacacgcg
ggcgcgatccgccgccgcctggatgaactctccgagcacctgaggatcggcgtgccggtc
tacctggtgctgaccaagtgcgacctggtggccggcttcggtgaattcttcgacgacatg
aacccggagctgcgcagccaggtctggggggtgtccttccccttgggcaagaccatggag
ggaagtgccgccaaggccttcgccgacgaataccggctgctgctggaccggctcaacacg
cgcacgctggatcgcctgcacgccgagcgcgaccgcggtcggcgtgcagcggtgctgtcg
ttcccgcagcagctggcagcgctgggcgagaccgcgcggcagttcgtcgagggtgtgttc
gccggccatgcctatggcacgccgccgctgctgcgtggcgtctacctcacctccggtacg
caggaaggcacgccgatcgaccgcatgatgggcgcggtcgcgcgcactttcgggctggac
gccgcacgggtgaacccgcagggcgcgcagcggcgtacgttcttcgtcgagcggctgctc
aaggaagtgctgttccgcgaatccggtctggccggcaccaaccccgccatcgagcggcgc
aaggtcgccgtgcaactggcgtcctacgccggcatggcgctgctgacggtgctgttgtgc
ttcggcttcgccaccagctatgcgcgcaaccgcgcctatctggggcaggtgcaggatgtg
ttgaaggattaccccgctggcgtggacctgccggccagcgccacgccgaaggaatacttc
gccaaggtgctcgaccggctggaggcgttgtcggccgtgcagcagacggctaccccggaa
ggcggcgtgccgatgtcgatgcggctgggcctgtaccagggcaaggcggtcggcgaggac
ctgcacgcggcctacctgcgcgagctcaatgcactgttgctccccggcgtgggcgcgcag
ttccgcggcggcctggccgccagcgcgtccgatccccaggcgctgtactactacctcaag
ggctacctgatgctgggcgagcccaagcatctggatgccgacgaactggtagccctggcc
aacctggaatggcgcaaggtgttccccgacgaacccgtgctgcagcaagcgctggccaag
cacttccaggcgctggtcgaggaacccggccagttgcgcgccctgccgctggacgcggcg
ctggtggagcaggcgcgcacgacgctgcgcacggcggacctgtcgacgctggtctacggc
agcatgaagctgtcggccgaaagcgccggcaagccgctgcaactggacaaggaactgggc
ctgctgggcaacgtgttccgccgccagagcggcaagccgctgtccgatccgctacccgcg
ctctacacgcaaccggtgttcgccatcgaggcagacaagggcgtggaggaggcggtcaag
cagttcgcctcggatgactgggtgttcggcgccgaaccgatcgatgcgctggcgcaggca
cgcctttcgcgccaggtgctggcgctctacgaggccgactacatcaaggcctgggatgcc
ctgctggccgacctgcagctgcaaccggcggccagcatccaggatgccagcaccatcgcc
gccaagctgtcgggcccgagctcgccgctcaagtcgctgctcaagctggtgcgcgacaac
accagcgacatgctgcgcgcgccggcgcccgacgccggcgacaaggcgctggatgcagcc
aaggatgcggccgccaagaaggccacgcagaacgcgctcggccgggcgttggcgaaggtc
ggcggtggtgccgggagcgcggaggacgcgccgcccggcagcgccatcagcgcgcacttc
gacacgctcaacaagctgagcgagggcgcgcccggcgccgcgccgatcgaccagacgctg
gccgcgctcgaccagctgagcaagacgctgctcaccatgaccgacttcagcgacgcggcc
ggtcaacccaacccgcagctgctgatggcgcagcaggcggccgcgcagctgccgccgccg
gtatcgggctgggtcgcctcgctcaccggcaagagccaggcgctggtcgccagcggtacc
aagggcgcgctcgacgagcagttccagcaggccgcggcacaggattgcgcggccttcacc
cagggccgctacccgttctccccgagcagccgcaacgacatcccggtgcagaacttcggc
gagatgtttggctacggcgggcgctacgacggcttcttcaagcagaccctggccaagctg
gtcgacaccagtggccgcaactggcagtggaagagcgggccgggcgcggtcagcggctcg
gcatcgatgctggcgcagatgcaactggccgacagcatcaagcagatgtacttccgcaac
ggcagccccacgcccgaagtcggtttcaccctgctcgcgcccgtgctggcgccgggcatc
ggccacttcgccatcgccatcgacgggcagaccttcgactacaagcccggcggcaccacc
agcatggcgatgaagtggcccggaccgaccccggggcaggtcaaggtctccgcgtgggac
accgccggcaacctgctcagcagctacgactaccagggcgactgggcgttcttccatgcg
ttgcaggcggcgcagctctcgcgccagtcggatttgcgctaccaggcgcacttcgacttc
ggcggccaggccgtgcagctggtggtgcaggccagcaacctgaagaacccgttcctcaac
acgcaggtgcaacgcttccggtgcgggggctag

DBGET integrated database retrieval system