Frateuria edaphi: LQ772_07065
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Entry
LQ772_07065 CDS
T08888
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fed03032
]
LQ772_07065
03036 Chromosome and associated proteins [BR:
fed03036
]
LQ772_07065
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_07065
DNA replication proteins [BR:
fed03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LQ772_07065
Chromosome and associated proteins [BR:
fed03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LQ772_07065
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LQ772_07065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UGB47046
LinkDB
All DBs
Position
1485388..1485693
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEALARRQTHLAFSDVELAVKSVIEQMSHALAQGERIEVRGFGSFALHYRPPRM
GRNPKTGDAVALPGKHVPHFKPGKELRERVNLSLQAEAELA
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatcgaggcgctggccaggcgccagacccatctcgcgttcagc
gacgtggagcttgcggtcaagagcgtgatcgagcagatgagccacgccctggcacagggc
gagcgcatcgaggtccgcggctttggcagcttcgcgctgcattaccggccgccacggatg
gggcgcaaccccaagaccggcgacgcggtggccctgccgggcaagcacgtgccgcatttc
aagccgggcaaggaactgcgtgaacgcgtgaatctgtcgctgcaggccgaagccgaactg
gcctga
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integrated database retrieval system
