Frateuria edaphi: LQ772_07075
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Entry
LQ772_07075 CDS
T08888
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
LQ772_07075 (lapB)
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Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_12
Zn_ribbon_LapB
TPR_2
ARM_TT21_C
TPR_7
TPR_19
TPR_11
TPR_8
NatA_aux_su
TPR_CcmH_CycH
DUF7129
Phage_tail_U
HypA
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
UGB47048
LinkDB
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Position
1486153..1487325
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AA seq
390 aa
AA seq
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MNVLYVLVLLVPAAFASGWFAARRAAVHRSGMRVSELSSDYFRGLNYLLNEEQDKAIEVF
LKLAEYNRDTVETHLALGNLFRRRGEVDRAIRLHQHLVSRPGLTEAMKTVALLELGEDYM
RAGLLDRAEALFSDLVAMNAHAPSALRHLVAIYQHERDWHKAIDHARRLETMTGDDESPM
IAQFYCELAEQARQHGARSEARDYLRQAFGCQADCVRAFMLTGRLHAEAGEHAEAVEAYE
AAVGADIAFVPEILPPLLNSYARTGQMERAEHFLRDILARYNGISPVLALTKLYNQRDGE
RAGIEFLTSQLRQRPSVRGLMALIDATMDKIEGEARENFLILRDLTRKLLEGQAMYRCSR
CGFGAKAHHWQCPSCKGWSTIRPIHGVANE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcctctacgtgctggttttgctggtgcctgccgcgttcgccagcggctggttt
gcggcccgccgggcagcggtccatcgctcgggcatgcgggtcagcgagctttcgtccgat
tacttccgcggcctcaactacctgctcaacgaagagcaggacaaggcaatcgaggtcttc
ctcaagctcgccgaatacaaccgcgacaccgtggaaacccatcttgcgttgggcaacctg
ttccgtcggcgcggcgaagtcgatcgcgccatccgcctgcaccagcacctggtttcgcga
ccgggcctgaccgaggcgatgaagacggtcgcgctgctggagctgggcgaggactatatg
cgagccggcctgctcgatcgcgccgaggcgctgttctccgatctggtcgccatgaacgcc
cacgcaccgtcggcgctgcggcatctcgtggccatctatcagcacgagcgcgactggcac
aaggcgatcgaccacgcgcgccggctcgagacgatgaccggtgatgacgaatcgcccatg
atcgcccagttctattgcgaactggccgagcaggcccgccagcatggcgcacggtcggaa
gcgcgcgactacctgcgccaggcgttcgggtgccaggccgattgcgtgcgcgccttcatg
cttaccggccgtctgcatgccgaagctggtgagcacgccgaagccgtggaggcctacgag
gccgccgtcggcgcggacatcgcgttcgtgccggaaatcctgccgccgctgctcaacagc
tacgcacgcaccgggcagatggagcgtgccgagcatttcctgcgtgacatcctcgcccgc
tacaacggcatctcgccggtgctggccttgaccaagctctataaccagcgcgatggcgaa
cgtgccggcatcgagttcctgacgtcgcagctgcgccagcgcccctcggtgcgcgggttg
atggcgttgatcgatgcgaccatggacaagatcgaaggcgaggcgcgcgagaatttcctg
atcctgcgcgacctcacgcgcaagctgctcgagggccaggcgatgtatcgctgcagccgg
tgcggcttcggcgccaaggcccatcactggcaatgtcccagttgcaagggatggagcacc
atccgcccgatccacggcgtcgccaacgagtga
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