Frateuria edaphi: LQ772_07130
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Entry
LQ772_07130 CDS
T08888
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
fed
Frateuria edaphi
Pathway
fed00020
Citrate cycle (TCA cycle)
fed00190
Oxidative phosphorylation
fed00650
Butanoate metabolism
fed00720
Other carbon fixation pathways
fed01100
Metabolic pathways
fed01110
Biosynthesis of secondary metabolites
fed01120
Microbial metabolism in diverse environments
fed01200
Carbon metabolism
Module
fed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
fed_M00149
Succinate dehydrogenase, prokaryotes
fed_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LQ772_07130 (sdhA)
00650 Butanoate metabolism
LQ772_07130 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LQ772_07130 (sdhA)
00720 Other carbon fixation pathways
LQ772_07130 (sdhA)
Enzymes [BR:
fed01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LQ772_07130 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
Pyr_redox_2
DAO
GIDA
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
UGB47058
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All DBs
Position
1495393..1497180
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AA seq
595 aa
AA seq
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MEAYKVQQHKYDVIVVGAGGAGLRATFGLAEKGLKAACITKVFPTRSHTVAAQGGISAAL
GNMGEDDWRFHFYDTIKGSDWLGDQDAIEYMCKEAPAAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTHYGKGTAQRTCAAADRTGHAILHTLYQQALAHDAAFFIEYFAIDLIFDEAGVC
RGVLALDMNEGTLHFFRGHAVVLATGGYGRAYFSATSAHTCTGDGGGMVLRAGLALQDME
FVQFHPTGIYGAGCLITEGVRGEGGYLTNSAGERFMERYAPSAKDLASRDVVSRAMTIEI
REGRGVGPDKDHIHLNLMHLGADVIHERLPGIAESARIFAGVDVTKEPIPVIPTVHYNMG
GIPTNYHGEVVQKKGDDVDAVVPGLFAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAGR
CAELIQPGTLHKDLPTSILDNALGRFDALRYAKGSKPTAQIRAEMQKTMQKDAAVFRTGE
TLGEGKRRISEVFDSFKDVSVTDRSLVWNSDLIETLELSNLLAQAVVTMHSAEQRMESRG
AHAREDFPERDDEHWMKHTLVSLSDAGQTSFDFRPVHMYTLTDEVDVVPPKKRVY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctacaaggttcagcaacacaagtacgacgtgatcgtggtcggcgccggcggc
gcgggcctgcgcgccaccttcggcctggcagagaagggcctgaaggccgcgtgcatcacc
aaggtcttcccgacccgctcgcacaccgtcgcggcgcagggcggtatctcggccgcgctg
ggcaacatgggcgaggacgactggcgcttccacttctacgacaccatcaagggctccgat
tggctcggcgaccaggatgcgatcgagtacatgtgcaaggaggctccggccgcgatcatc
gagctggagcactacggcgtgccgttctcgcgcaccgaggaaggcaagatctaccagcgc
ccgttcggtggcatgaccacgcactacggcaagggcactgcgcagcgcacgtgcgccgcc
gccgaccgcaccggccacgcgatcctgcacacgctctaccagcaggcgctggcgcacgac
gcggcgttcttcatcgagtacttcgcgatcgacctgatcttcgacgaggccggcgtctgc
cgcggcgtgctcgcgctggacatgaacgagggcacgctgcacttcttccgcggtcacgcc
gtggttctggcgaccggcggctacggccgcgcctacttcagcgcaacctcggcgcacacc
tgcaccggcgacggtggcggcatggtgctgcgcgcgggcctcgcgctgcaggacatggaa
ttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgagggcgtg
cgtggcgagggcggctacctcaccaactccgcgggcgagcgcttcatggagcgctacgcg
ccgagcgccaaggacctggcctcgcgcgacgtggtcagccgtgcgatgacgatcgagatc
cgcgagggcaggggcgtcggtccggacaaagaccacatccacctcaacctcatgcatctg
ggcgccgacgtgatccacgagcggctgccgggcatcgccgagtcggcgcgcatcttcgcc
ggcgtggacgtaaccaaggagccgatcccggtcattccgaccgtgcactacaacatgggc
ggcatcccgaccaattaccacggcgaagtggtgcagaagaagggtgacgacgtcgacgcc
gtggtgccgggcctgttcgccatcggcgaggcggcctgcgtgtcggtgcacggcgccaac
cgcctcggttcgaactcgctgctggacctggtggtgttcggccgcgccgtcgcgggccgc
tgcgccgagctgatccagccgggcacgctgcacaaggatctgccgaccagcattctggat
aacgcgctgggccgtttcgacgcgctccgctatgccaagggcagcaagcccaccgcgcag
atccgcgccgagatgcagaagacgatgcagaaggacgcggcggtgttccgcaccggcgag
acgctgggcgagggcaagcgacgcatctccgaggtgttcgactcgttcaaggacgtcagc
gtcaccgaccgctcgctggtgtggaactccgacctgatcgagacgctggaactgtccaac
ctgctcgcgcaggcggtcgtcaccatgcactcggccgagcagcgcatggaaagccgcggc
gcgcatgcccgcgaggacttccccgagcgcgacgacgagcactggatgaagcacaccctg
gtcagcctgagcgacgcgggccagaccagcttcgacttccgcccggtgcacatgtacacg
ctgaccgacgaggtcgacgtggtgccgccgaagaagcgcgtttactga
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