KEGG   Frateuria edaphi: LQ772_07485
Entry
LQ772_07485       CDS       T08888                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
fed  Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:fed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fed03032]
    LQ772_07485
   03036 Chromosome and associated proteins [BR:fed03036]
    LQ772_07485
   03400 DNA repair and recombination proteins [BR:fed03400]
    LQ772_07485
DNA replication proteins [BR:fed03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LQ772_07485
Chromosome and associated proteins [BR:fed03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LQ772_07485
DNA repair and recombination proteins [BR:fed03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LQ772_07485
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 HU-DNA_bdg Arteri_nsp7a SSB
Other DBs
NCBI-ProteinID: UGB47118
LinkDB
Position
1564321..1564593
AA seq 90 aa
MNKTDLINAVAEKAELTKADAGRALEAFFETVQKALKKGDDVSVVGFGTFTVRKRAARTG
RNPRTNETIKIKASKVPAFKAGKTLKDALN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaaccgatctgatcaatgccgtcgccgaaaaggccgagctgaccaaggccgac
gccggccgtgccctcgaagcgttcttcgagacggtgcagaaggcgctgaagaagggcgac
gatgtgtcggtcgtcggcttcggcacgttcaccgtgcgcaagcgcgccgctcgcaccggt
cgcaacccgcgcaccaacgagacgatcaagatcaaggcttccaaggtgccggcgttcaag
gctggcaagacgctcaaggatgccctaaactga

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