Frateuria edaphi: LQ772_08140
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Entry
LQ772_08140 CDS
T08888
Name
(GenBank) hypothetical protein
Organism
fed
Frateuria edaphi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
ChitinaseA_N
fn3
Motif
Other DBs
NCBI-ProteinID:
UGB47239
LinkDB
All DBs
Position
complement(1709653..1715061)
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AA seq
1802 aa
AA seq
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MNLSPQGRWARLVVLGLCSFGCVLHAQSVTPEGEYKKLIRVSEDLQPLGENPFGENISLY
SGSLSFEQTDVSLSGNGPTLSLSRRFDLPAQKDHTNLLDSAFGNWDIDLPRITTMTANQQ
NVTGWMVASPNPLAICSQFDAPPTVDPPIGDSARRPWSPSQWWHGYQLVIPGQGSQDLLE
RTAENPVAPQIGGLSFPIVTKQNWAIGCPGPAENDSTREAFLAVAPDGTKYTFAHLAYRW
APNMDRQLDSVLMPDALVAGEMHPMLAPSDFLLRREASMLVTRIEDRFHNSITYSYDRYD
RLTSITASDGRELSVQYTDETPLIRSVTLQPKGDRPRTWVYSYAHLPDDRASAVELTSVD
LPDGKGHWTFNLSDLTNKAWVDTEETYSNCDSIATPHNLGTSYTGTITHPSGLTGSFTVT
PVKRGRSYVYRECWIGEAGIPITPTSPSTFALTPNAWNSMSITARQYTGAGIPSGRTWSY
SYSSSNESWTQDSCAAAGTCTTTVWTDETAPDRTRTRQTFSNRYDETESRLIRTDRYDKD
GFLVQSVINTYSPSDAGPWPARLGRNPQAYINQAQTTRLTPLTKRIIAQDQDTYTWEADA
FDALAQATKVQRYSATAGRCAIAEQTTYLNDTTNWVLGLPAKVSRLPAQVAGMPSCGTTS
EVVDEYRYSTPDDTLAERWHFGQLVMSYAFYSSADPNAQLRGQLKSFTDGNSHTTTLSGY
MRGVPQAISYPDLRSQSLVVDEFGQITSITDQAEATTSYRYDDVGRLTRIDYPGGDERAW
YPKTFSYAPVSGDVLSSLHWKRTVSKGNQLQVTHFNAMLQPVLVDTSIAGADDSHISQRK
DYDYRGRTVFSSYSVPGTPDLASITAGFRSYYDVLGRVTETDQTAQGGLLKTLSAYEPGA
STAVTDPRNKVTTTTFQVFDEPSNERPIKVEAPTGLVQTIARDQYGNPLWINQAGPYGTG
TVSLTKTLTYDSYHRLCRTTEPESGSEVMAYDGANNLWWSAAGLSLTGSGCGLEQVADAG
KTVRHYDEMNRVLVVDAPEGTQDTTYHYDPLGNPDSAISGISTWSAKRNKLGQLVSETLQ
VTGQDAWKIGYAHDAYGNLQSLTYPDGTVVNYAPDALGRATQVDAYATGVHYYPNGEVQA
FTLGNNTLYSADQNARQLLSNFTYERNASTWDISQELTYDPNGNITHVEDFVDGRRTKDF
HYDDLNRLDSATASNLWGTETYSYDPLNNIRSKVGTGTATYNYDSTNRLVSITGAINSSF
GYDNRGNVASKNGTTLQFDQKNQLLQIDGIASYAYEAAGRRVMKTTAGGTSTFYFYSQAG
QLLHQYDAASNQATSYIYLGNKLIAKDTILLTIPDPPASISAPASAGTSYRVSWSESANA
AAYVLEQSKDGGVTWSFIYKGSTTGLTFYPTANGSYQYRVKASNVKGYSAYAVSGVVEVT
LPPTAAPTVTAPPTNSTGNYTVTWNAVAAATSYAVDKQLNGGTWMRAQDGSALSLAVSDA
GNGTYHYRVRGENKGGPGPWSTIAETVVGRIPVAPAAPHISISGNDWKPVFAVSWGSVPW
ATRYVAEMVGEDTVVIYDGPNTSASIMVLDEGMVQFHVKACSNYGCSPWSPYTTHGGSAP
TSAPTISVPTSSSTGSYTVSWTAVSAASSYKLQEQVNGSTTWTSITNTTGTSFALSGKAN
GTYGYRVMACNANGCGPVSAAKSVTVGVVPATPAAPHVSVSGVDWKQTLTVSWTAVSRAT
SYQVNVVEPGATTGDINDNGSSTTFSMLAFDGGTWKFRVRACNSVGCSGWSAYGSGTVAP
SL
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtcgccacagggacggtgggcccgtcttgtcgtgcttggtttgtgctcgttt
ggctgcgtgttgcacgcgcagtcggtgacgccggaaggcgagtacaagaagctcattcgc
gtcagcgaggacctccagccgctgggggagaacccgttcggcgagaacatcagcctctac
agtggcagtctctcattcgagcagactgacgtaagcctgtccggcaacggccctacgttg
tccctcagtcgtcggttcgacctgcctgcccagaaggaccacacgaaccttctggacagc
gcgttcggcaattgggacattgacctgccgcgcatcaccacgatgacggccaaccagcaa
aacgtgacgggttggatggtggccagccccaacccgcttgcaatctgcagccagttcgac
gcaccgccgacggttgatccgcccattggcgacagcgcgcgccggccgtggagcccctcg
caatggtggcacggctatcagctcgtgatcccagggcagggtagccaagacctgctcgag
cgaacagccgagaacccggtggcgccgcagatcggcggcttgagctttcccatcgtcacc
aagcagaactgggccatcggttgccccgggcccgcggagaatgacagcacgcgtgaggcc
ttcctcgcggttgcaccggatggaaccaagtacacattcgctcacctggcctatcgctgg
gcgccgaacatggaccgccaactcgattcggtcctgatgccggacgcgttggtcgccggc
gagatgcatccgatgcttgcgccgtcggatttcctgttgcggcgcgaagcttcgatgctg
gtgacccgaattgaagaccggttccacaactcgatcacctatagctacgaccggtatgac
cgactgacctccataacggcgagcgatggtcgagagctctccgtgcagtacaccgatgag
accccgctaatccgttcggtgacgctgcagcccaaaggcgatcgcccgcgaacgtgggtg
tacagctacgcccatctacccgatgaccgtgcgagcgcggtcgaattgacttcggtcgac
ttgcctgacggcaaaggtcactggacgttcaacctttccgaccttaccaacaaggcgtgg
gtcgataccgaggaaacctattcaaactgtgattcgattgctaccccgcataacctcgga
accagctacacgggcaccatcactcatccgtctggcctgacgggttcgttcacggtaact
cctgtaaagcgggggcgctcgtacgtttatcgcgagtgctggatcggcgaggcgggtatt
cccataacgccgaccagtcccagcacgtttgcgttgacgcccaacgcgtggaactcgatg
tcgattacggcccgccagtacaccggcgcgggaatcccgtcgggccgtacatggtcctac
agctactcttcgtcaaacgaaagctggacgcaggacagctgcgctgccgctggcacatgc
actaccactgtctggacggacgaaacggcgcccgatcggacgcgcacacgtcagaccttc
agcaatcgctatgacgaaactgagagccggctaatccggaccgaccgctatgacaaggac
ggcttccttgtgcagtcggtgatcaacacatactcgccctccgatgccgggccctggccg
gcgcgtcttggaagaaatccgcaggcatacatcaatcaggcccagaccacccgactgacc
cccctcactaaacggatcatcgcccaggatcaggacacatacacttgggaagccgatgcg
ttcgacgcgttggcgcaagcgacaaaagtgcagcgctatagcgcgaccgcgggtcggtgc
gccatcgcggaacagaccacctacctcaatgacaccaccaactgggttttaggtctgccc
gctaaggtgtcccgattgcctgcgcaggttgccggcatgccttcatgcggtactacctca
gaggtggtcgacgagtatcgctacagcactcccgacgacactctggccgagcgctggcac
ttcggccagctagtaatgagctatgccttctattccagcgcagatccaaacgcccagctg
agagggcagctcaagagtttcaccgacgggaattcccacactacgacgctcagcggctac
atgcggggcgtaccgcaggcgatcagctacccggacctacgttcccagagcttggtggtg
gacgagtttggccagatcacgagcatcacagaccaggccgaggcaacgacctcctatcgg
tacgacgatgtcggccggttgacccgcatcgactatccgggcggcgacgagcgcgcttgg
tatccgaagacattcagttatgcccctgtcagcggcgatgtcctaagcagcctgcattgg
aagcgcacggtttcaaagggcaaccagcttcaggtcacgcacttcaacgccatgcttcag
ccggtattggtggatacctctatcgccggtgccgacgattcacacataagccagcgtaag
gactatgactatcgtggaaggacggttttctcgtcctattcggtcccgggtactcccgat
cttgccagtatcacggcgggcttcaggtcgtactacgacgtcttgggcagagtgaccgaa
accgaccagacggcccaaggcggcctcttgaagacactgagcgcttatgaaccaggagcg
agcaccgcggttaccgatccgcgaaacaaggtcaccacgaccaccttccaggtcttcgac
gaaccctcgaatgagcgcccgatcaaagtcgaggctccgaccgggctagtccagactatc
gcgcgtgaccagtatggcaatccgctgtggatcaaccaggccggaccttatggcaccggc
acggtgagcctcaccaagacgctgacctacgacagctatcaccggttgtgccgcaccacc
gaaccggaaagcggcagtgaggtgatggcttacgacggggccaacaacctgtggtggagc
gcggcgggtctgagcttgaccggtagcggctgcggcttggagcaggtcgccgatgccggc
aagacggtgcgtcattacgacgaaatgaaccgagtgctcgttgtagatgccccagagggc
acacaggacacgacctaccactatgaccctctgggcaatcctgacagtgcgatctccggc
atcagcacgtggagcgcgaagcgcaacaagctggggcagctggttagcgaaacgttgcaa
gtcactggccaggatgcctggaagatcgggtacgcccatgatgcttacggcaatctacag
agcctgacctaccctgatgggacggtggtcaactatgcacccgacgcattagggcgcgcg
acccaggtagatgcctatgccacaggcgtgcactactaccctaacggcgaagtgcaagcg
ttcaccttaggtaacaacacgctttactcagccgaccagaacgcacgccagttactgagc
aatttcacctatgagcgcaacgccagcacctgggacataagtcaggagctgacctacgac
ccgaatggaaatatcactcatgtggaagatttcgtcgacggacggcgaacgaaggacttc
cactatgacgacctgaaccggctcgacagtgcgacagcctcgaacctgtgggggactgag
acgtatagctacgacccgctcaacaacatcaggagcaaggtcggtaccggtactgcgacc
tacaactacgactcgaccaatcgtctggtcagtatcacgggcgccatcaacagcagtttt
ggctacgacaatcgcggcaacgtcgcaagcaagaacggcacgacgctccagttcgaccag
aagaatcagctacttcaaatcgacggcatagcgagctacgcctatgaagccgcaggccgg
cgggtgatgaagaccactgcgggagggacgagcaccttctatttctacagccaagccggc
caactcctgcatcagtacgacgctgctagcaatcaagccacaagctacatctaccttggc
aacaagctcattgctaaggacaccattttgctcaccattcctgacccacccgcttcgatc
tctgcaccagcgagcgcaggtacgagctatcgcgtgagctggtcggagtccgccaacgca
gcggcgtacgtactggaacaaagcaaggacggcggagtcacgtggtcgttcatttacaag
ggttcaacaactggcttgacgttctatccgacggccaatggcagctaccagtaccgcgtg
aaggcgtccaacgttaaagggtacagcgcctatgcggtaagcggcgtagtggaagttact
ttacctcccacagccgcaccaaccgtgacagctccgccaaccaacagcactggcaattac
acggtgacctggaacgcagtagctgcagcgactagctacgccgtcgataagcagttgaac
ggtggcacatggatgagggcccaggatgggagcgctctcagccttgccgtgagcgatgcc
ggtaacggcacctatcattaccgcgtccgcggcgagaacaaaggcggtccggggccgtgg
agcaccattgccgagaccgtggtggggcgcatccccgtcgcccctgcggcaccccacatc
agtatcagcggaaacgactggaagccggtgttcgcggtctcgtggggctccgttccgtgg
gcgacccgatacgtcgctgaaatggtcggggaagacaccgtggtcatctatgacggcccg
aacacctccgcctccatcatggtgctggatgagggcatggtccagttccatgtgaaagcg
tgcagcaactacggatgctcgccctggagcccctatacgacccatggtggttctgcgccg
accagcgcgccgacgatcagtgttccgacctcaagtagtactggtagctacaccgtgagc
tggaccgccgttagcgcggccagcagctacaagctgcaggagcaggttaatggcagcacc
acctggacgagcatcacaaacaccaccgggaccagtttcgccttgagcggaaaggccaac
ggcacgtatggataccgcgtcatggcatgtaacgccaacggctgtggcccggtcagcgca
gcaaagtcagtgaccgtaggagttgtaccagccactcccgccgcgccgcatgtctccgtc
agcggcgtggattggaagcaaactcttaccgtcagctggactgccgtatcgcgggccaca
agctaccaagtcaatgtggtggaaccaggcgctacgactggcgacatcaacgacaacggg
tcttccacgactttcagcatgctggcgttcgacggtggtacctggaagttcagggtccgc
gcttgtaattcggtgggctgttcgggttggagcgcgtacggctccggcactgtggctcca
agtctttag
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integrated database retrieval system
