Frateuria edaphi: LQ772_08560
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Entry
LQ772_08560 CDS
T08888
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fed
Frateuria edaphi
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_08560
Enzymes [BR:
fed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LQ772_08560
DNA repair and recombination proteins [BR:
fed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LQ772_08560
Prokaryotic type
LQ772_08560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UGB47318
LinkDB
All DBs
Position
1798768..1800183
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AA seq
471 aa
AA seq
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MTTALVLFRRDLRVADNPALSAACASHARVLPVYIHAPAEDGDSAPGAASRWWLHHSLDA
LERDLRERQAGLHLAQGPTLDTLLDLVARSGARTVHWNRRYEPGAIAQDTRLKTALQERG
IEVHSHNAALWCEPWSIATQAGDPYRVFTPYWRNLRTQLAVQEPLPVPVFREWTALPGAQ
PLAALDLLPAIAWYGGMAATWRPGEAGAHEWLEVFADDALANYAEARDLPARHGTSRLSP
HLHFGEISPRQIHHELERRNARVDVRRRADLEPYLRELGWREFAHHLLFHFPDTPGRNFN
PRFDDRLWEPPDEPALERWRRGRTGIPLVDAGMRELWHTGWMHNRVRMIVASFLTKNLRQ
HWHHGARWFWDTLVDADLANNTMGWQWVAGCGADAAPYFRVFNPVTQAQRFDPQGAYLSR
WLPELADVPPALMHEPWKDPALLRRSGYPAPMVDLGQSRQRALHAYQRLKG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcgctggtgctcttccggcgcgaccttcgcgttgccgacaatccggccctg
agcgcggcctgcgcatcgcacgcgcgcgtgctaccggtctacatccacgcgcccgccgag
gacggcgattccgctcccggggccgctagccggtggtggttgcaccattcgctggacgcc
ctggagcgggacctgcgcgaacgtcaggccgggctgcaccttgcgcaggggccgacactg
gacaccctgctcgacctggtcgcccgcagcggcgcgcgcacggtgcactggaatcgtcgt
tacgaaccgggcgccatcgcacaggacacccgcctgaagaccgcattgcaggaacgcggc
atcgaggtgcatagccacaacgccgcgctgtggtgcgagccctggtccatcgctacccag
gccggcgatccgtaccgcgtattcaccccctactggcgcaacctgcgcacgcaactggcc
gtgcaggaacccttgccagtgccggtctttcgcgaatggacggcgctgccgggcgcgcag
ccgctggctgcgctggatctgttgccggcaatagcctggtacggcggcatggcagccacg
tggcgacctggcgaggccggcgcgcacgaatggctcgaggtcttcgcggacgacgcgctg
gcgaactatgccgaggcgcgcgacctgcctgcgcgccacggcacctcgcggctgtcgccc
cacctgcacttcggcgagatctcgccgcggcagatccaccacgagctggaacggcgcaac
gcacgcgtcgacgtacgacggcgggcggacctcgaaccctacctgcgcgagctcgggtgg
cgcgagttcgcgcaccacctgttgttccactttcccgacacgcccggtcgcaacttcaac
ccgcgtttcgacgaccggttgtgggagccgccggacgagccagcgctggagcgctggcga
cgcggccgcaccggcataccactggtggacgcaggcatgcgcgagctgtggcacaccggc
tggatgcacaatcgcgtgcgcatgatcgtcgccagcttcctgaccaagaacctgcgccag
cactggcaccacggggcgcgctggttctgggacacgctggtggatgccgacctggccaac
aacacgatgggttggcaatgggtggccggttgcggcgcggacgcggcaccctactttcgc
gtgttcaatcccgtcacgcaggcgcagcgcttcgacccgcaaggcgcctacctctcccgc
tggctaccggagctggcggacgtgccgccggcgctgatgcacgaaccgtggaaagacccg
gcgctgcttcgacgcagcgggtatccggcgccgatggtggacctgggccagtcgcgccag
cgcgcgctccatgcctaccagcgcctgaagggctga
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