Frateuria edaphi: LQ772_08905
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Entry
LQ772_08905 CDS
T08888
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
fed
Frateuria edaphi
Pathway
fed03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LQ772_08905 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fed03019
]
LQ772_08905 (orn)
03009 Ribosome biogenesis [BR:
fed03009
]
LQ772_08905 (orn)
Messenger RNA biogenesis [BR:
fed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LQ772_08905 (orn)
Ribosome biogenesis [BR:
fed03009
]
Eukaryotic type
Pre-60S particles
RNases
LQ772_08905 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UGB47382
LinkDB
All DBs
Position
complement(1883791..1884351)
Genome browser
AA seq
186 aa
AA seq
DB search
MNQANDDNLIWIDLEMTGLDTDNDSILEIATIVTDKELNVLAEGPVFAIRHEVDRLESMD
SWNRNQHSKSGLWQQVLDSTTDHAQAEQATLEFLKVWTPPGKSPMCGNSICQDRRFLHRQ
MPRLERHFHYRNLDVSTLKELSRRWSPTIARGLSKESAHTALSDIRDSIDELRYYRQHMG
ALGGQA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagcgaatgacgacaacctgatctggatcgatctggaaatgaccggcctggat
acggacaacgattccatcctggaaatcgccacgatcgtgacggacaaggagctgaacgtg
ctcgccgaagggccggtcttcgcgatccgccacgaggtcgaccggctggaatcgatggac
agctggaaccgcaaccagcacagcaagtcgggtctgtggcagcaggtgctcgattcgacc
accgatcacgcgcaggccgaacaggccacgctcgaattcctcaaggtgtggacgccgccg
ggcaagtccccgatgtgcggcaactcgatctgccaggaccggcgtttcctgcatcgtcag
atgccccggctggagcgacatttccactatcgcaacctggacgtttccacgctcaaggaa
ctgtcgcgccgctggtcgccgacgatcgcgcgcggcctgagcaaggagtcggcgcacacc
gcgctgtccgacatccgcgattcgatcgacgagctgcgctactaccgccagcacatgggc
gcgctcggcggccaggcctga
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