Frateuria edaphi: LQ772_09210
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Entry
LQ772_09210 CDS
T08888
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fed
Frateuria edaphi
Pathway
fed03030
DNA replication
fed03430
Mismatch repair
fed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQ772_09210 (dnaQ)
03430 Mismatch repair
LQ772_09210 (dnaQ)
03440 Homologous recombination
LQ772_09210 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fed03032
]
LQ772_09210 (dnaQ)
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_09210 (dnaQ)
Enzymes [BR:
fed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ772_09210 (dnaQ)
DNA replication proteins [BR:
fed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQ772_09210 (dnaQ)
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQ772_09210 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
T2SSG
Motif
Other DBs
NCBI-ProteinID:
UGB44182
LinkDB
All DBs
Position
complement(1944983..1945717)
Genome browser
AA seq
244 aa
AA seq
DB search
MRQIVLDTETTGLEVRQGHRLIEIACVELIERRPSGRHWQTYLNPERAIDEGARQVTGIE
DEFLLDKPRFAEVVAEFLEFIGDAELIIHNASFDVGFLDAELARVGAHMGCIADRCRVID
TLAMARERYPGQRNSLDALCKRLGVDNSARDLHGGLIDAQLLADVYLYMTSGQVALDLAF
EGATDEAGAAVLAPVTLLRRPRVLRADANEIAAHESRLDALDKASQGVSVWRRLEQPEAA
LAEA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatcgttctggataccgagaccacgggtctggaagtgcgccagggtcaccgg
ttgatcgaaatcgcctgcgtggaacttatcgagcgacgtcccagcggccggcactggcag
acctatctcaaccccgagcgtgcgatcgacgaaggcgcgcggcaggtcaccggcatcgag
gacgaatttctgctcgacaagccgcgtttcgccgaggtcgtcgcggagttcctcgagttc
atcggcgatgccgagctgatcatccacaacgcaagtttcgacgtcggcttcctcgacgcg
gagctggcgcgcgtgggcgcgcacatgggctgcatcgccgaccgctgccgcgtgatcgac
accctggcgatggcgcgcgagcgctatcccggccagcgcaacagcctggatgcgctgtgc
aagcgcctgggcgtggataactccgcgcgcgacctgcacggcggcctgatcgacgcccag
ctgctggccgacgtctacctgtacatgacctccggccaggtcgcgctggacctggcgttc
gaaggcgccaccgacgaagccggcgcggccgtgctggcgccggtcacgctgctgcgccgc
ccgcgcgtgctgcgggcggatgccaatgaaatcgctgcgcacgaaagccgtctggatgcg
ctggacaaggcctcccaaggagttagtgtgtggcgtcggctggagcagcctgaagcggcg
ttggccgaagcctag
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