Frateuria edaphi: LQ772_10095
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Entry
LQ772_10095 CDS
T08888
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fed
Frateuria edaphi
Pathway
fed03030
DNA replication
fed03430
Mismatch repair
fed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LQ772_10095 (dnaX)
03430 Mismatch repair
LQ772_10095 (dnaX)
03440 Homologous recombination
LQ772_10095 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fed03032
]
LQ772_10095 (dnaX)
03400 DNA repair and recombination proteins [BR:
fed03400
]
LQ772_10095 (dnaX)
Enzymes [BR:
fed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LQ772_10095 (dnaX)
DNA replication proteins [BR:
fed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LQ772_10095 (dnaX)
DNA repair and recombination proteins [BR:
fed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LQ772_10095 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_30
AAA_19
AAA_5
AAA_18
AAA_14
nSTAND3
AAA_7
Mg_chelatase
TsaE
TniB
SKI
DUF3646
Rad17
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UGB44350
LinkDB
All DBs
Position
complement(2137271..2138938)
Genome browser
AA seq
555 aa
AA seq
DB search
MSYQVLARKWRPRKFVELVGQEHVVRALTNALDTGRMHHAYLFTGTRGVGKTTIARIFAK
SLNCERGESADPCGECAVCTAVDAGRFVDLLEIDAASNTGVDDVREVIENAQYAPARGRF
KVYLVDEVHMLSKPAFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLKFNLKRLLP
EQISGQMRHILEAEKIVYEDAAIGELARGADGSLRDGLSLLDQAIAYGGGALNADDVRAM
LGSVARGQVLGVLDALADGDGSRLMAECERIASYSPDFGGVLDDLAATLHRAQLMQLVPG
YHAQSDGEDAESLAALAERMQPEDVQLYYQIATTGRRDLALAPDARTGFEMALLRMLAFR
PGGADEPAPTERMPRPAPAARPPSPIGRAEPPMLSASPMPRAPVASAPAPITHAAPVARA
PVPTDARGLPRWDALIEQAGLRGPLGQLAQNAALRERDGNTLVLALQPAHMHLAVEPMVG
QMADRIGDVLGERIKLRFVADSQGATQTPAARAASARESAQSAAEQAIEEDPLVQSLKRE
FGARVVPQSIKPIES
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaggttctcgcccgcaagtggcgcccgcgcaagttcgtcgagctggtcggg
caggaacacgtggtgcgcgcgctgacgaacgcgctggacaccgggcgcatgcatcacgcg
tacctcttcaccggcacgcgcggcgtgggcaagaccaccatcgcgcgcatctttgccaag
tcgctcaactgcgagcggggcgaatcggccgatccctgcggcgaatgcgccgtctgcacg
gcggtggatgccggccgcttcgtcgacctgctggaaatcgacgcggccagcaacacgggc
gtggacgacgtgcgcgaggtgatcgagaacgcccagtacgcaccggcgcgtggccgcttc
aaggtgtacctggtggacgaggtgcacatgctctccaagccggccttcaacgccttgctc
aagacgctggaggagccaccgccgcacgttaagttcctgctggcgacgaccgacccgcag
aagctgccggtgaccgtgttgtcgcgttgcctgaagttcaacctgaagcgcctgctgccc
gagcagatttccgggcagatgcgccacatcctggaagcggaaaagatcgtttacgaggac
gccgccatcggcgaactggcgcgcggtgcggacggctcgctgcgcgacggcctctcgctg
ctggaccaggcgatcgcctacggcggcggtgcgctcaacgccgacgacgtgcgggcgatg
ctcggcagtgtggcgcgcggccaggtgctgggtgtactcgatgcgctggccgatggcgat
ggctcgcggttgatggccgagtgcgagcgcatcgcctcgtactcgcccgacttcggcggc
gtactggacgacttggccgcgaccctgcatcgcgcccaactgatgcagctggtgccgggc
taccacgcccagagcgatggcgaggatgcggaaagcctcgctgcgctcgccgagcgcatg
cagccggaagacgtgcagctctactaccagattgccaccaccggtcgacgcgatctcgcg
ctggcgcccgacgcgcgcaccggtttcgagatggcgctgctgcgcatgctggcgtttcgc
ccgggcggagcggacgaacccgcgccgaccgaacgcatgccgcggccggcgcccgcggcg
cgtccgccatcgcccatcgggcgcgccgagccacccatgctcagtgcctcgcccatgccg
cgcgctccggtggcctccgcgcccgcaccgatcacgcatgcggccccggtcgcgcgtgcg
ccggtgccgaccgatgcccgcggtctgccgcgctgggacgcactgatcgaacaggcgggc
ctgcgtggcccgctcggccagctggcacagaacgccgcactacgcgagcgcgacggcaac
acgctggtgctggcgctgcagccggcgcacatgcacctggccgtcgagccgatggttggt
caaatggccgaccgcatcggcgacgtgctgggtgagcgcatcaagctgcgcttcgtcgcc
gacagtcagggcgccacccagacgcctgccgcccgcgccgcctcggcccgcgaaagcgcg
caaagcgccgccgagcaggcgatcgaggaggatccgctggtgcagtcgctcaagcgcgag
ttcggcgcccgcgtggtaccgcagtccatcaaacccatcgaaagttga
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